Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleosome assembly

Term: GO:0006334  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene166677 SustainPine v3.0 218
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 4.0e-21
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene166820 SustainPine v3.0 345
AutoFact: histone H2A [Hyacinthus orientalis] 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene169468 SustainPine v3.0 453
AutoFact: Nucleosome assembly protein n=3 Tax=Arabidopsis RepID=Q94K07_ARATH 0.0001
Sma3: Nucleosome assembly protein, putative 7.797e-06
coding
sp_v3.0_unigene172486 SustainPine v3.0 348
AutoFact: DUF571 multi-domain protein 4.0e-15
Sma3: Histone H1 3.092e-29
coding
sp_v3.0_unigene172674 SustainPine v3.0 207
AutoFact: HC2 multi-domain protein 4.0e-09
coding
sp_v3.0_unigene174597 SustainPine v3.0 320
AutoFact: HC2 multi-domain protein 2.0e-10
coding
sp_v3.0_unigene174717 SustainPine v3.0 300
AutoFact: HC2 multi-domain protein 1.0e-08
Sma3: Os03g0799000 protein 8.285e-06
coding
sp_v3.0_unigene182668 SustainPine v3.0 289
AutoFact: Histone domain containing protein 2.0e-10
Sma3: Histone H2A 0.0
putative_coding
sp_v3.0_unigene185804 SustainPine v3.0 772
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene186078 SustainPine v3.0 442
AutoFact: Histone H4, major n=31 Tax=Oligohymenophorea RepID=H41_TETPY 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.127e-11
Complete
sp_v3.0_unigene186142 SustainPine v3.0 560
AutoFact: Histone H4 n=1 Tax=Podospora anserina S mat+ RepID=B2B229_PODAN 1.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene186144 SustainPine v3.0 490
AutoFact: Histone H2A n=3 Tax=Eukaryota RepID=Q8GUH3_ARATH 0.0
FL-Next: sp=Histone H2A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene188391 SustainPine v3.0 357
AutoFact: Histone H2b (Fragment) n=2 Tax=Batrachochytrium dendrobatidis JAM81 RepID=F4NV72_BATDE 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 0.0
N-terminus
sp_v3.0_unigene188436 SustainPine v3.0 558
AutoFact: Histone H3 (Fragment) n=1 Tax=Solenopsis invicta RepID=E9IYV7_SOLIN 4.99983e-42
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene188815 SustainPine v3.0 443
AutoFact: Histone H4 n=1 Tax=Podospora anserina S mat+ RepID=B2B229_PODAN 0.0
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.127e-11
Putative Complete
sp_v3.0_unigene189345 SustainPine v3.0 726
AutoFact: Chromatin assembly factor 1, subunit A, putative n=1 Tax=Ricinus communis RepID=B9RM13_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene190109 SustainPine v3.0 438
AutoFact: PREDICTED: histone H2A-like n=2 Tax=Anolis carolinensis RepID=UPI0002038DF2 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene190735 SustainPine v3.0 242
AutoFact: TauE multi-domain protein 1.0e-07
coding
sp_v3.0_unigene191351 SustainPine v3.0 261
AutoFact: PREDICTED: similar to histone H3, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C041 3.0e-24
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene191710 SustainPine v3.0 445
AutoFact: Histone H3 n=30 Tax=Eukaryota RepID=H3_ASPFU 3.0e-29
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain