Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome assembly

Term: GO:0006334  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene42317 SustainPine v3.0 502
AutoFact: GF20391 n=4 Tax=Coelomata RepID=B3N2H1_DROAN 5.0e-30
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.127e-11
C-terminus
sp_v3.0_unigene42354 SustainPine v3.0 748
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.463e-33
Complete
sp_v3.0_unigene42591 SustainPine v3.0 1311
AutoFact: MYB transcription factor MYB107 [Glycine max] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Single myb histone 3.515e-11
Putative Complete
sp_v3.0_unigene43412 SustainPine v3.0 1017
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene44826 SustainPine v3.0 1454
AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 4.011e-14
Complete
sp_v3.0_unigene46129 SustainPine v3.0 928
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene46429 SustainPine v3.0 489
AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.364e-35
C-terminus
sp_v3.0_unigene46432 SustainPine v3.0 167
AutoFact: Histone-like protein n=10 Tax=Fritillaria RepID=O22648_FRIAG 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone H1 4.711e-09
Internal
sp_v3.0_unigene46780 SustainPine v3.0 916
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene47929 SustainPine v3.0 1180
AutoFact: Chromatin assembly factor 1, subunit A, putative n=1 Tax=Ricinus communis RepID=B9RM13_RICCO 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Putative N-terminus
sp_v3.0_unigene48488 SustainPine v3.0 451
AutoFact: PREDICTED: histone H4-like n=1 Tax=Pan troglodytes RepID=UPI00020E3732 1.0e-05
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene49501 SustainPine v3.0 197
AutoFact: Extensin-like protein n=2 Tax=Arabidopsis RepID=O49448_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 2.105e-23
Internal
sp_v3.0_unigene49560 SustainPine v3.0 801
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 9.94922e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene49562 SustainPine v3.0 411
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene50327 SustainPine v3.0 883
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-34
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene50816 SustainPine v3.0 765
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 4.0e-06
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 5.252e-07
Putative Complete
sp_v3.0_unigene52142 SustainPine v3.0 249
AutoFact: PREDICTED: histone H4 replacement-like [Bos taurus] gb|DAA13862.1| histone H4 replacement-like [Bos taurus] 1.0e-13
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.229e-11
N-terminus
sp_v3.0_unigene52183 SustainPine v3.0 155
AutoFact: Histone domain containing protein 3.0e-09
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene52546 SustainPine v3.0 337
AutoFact: Histone H1 subtype 7 n=4 Tax=Pisum sativum RepID=Q4A196_PEA 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene53064 SustainPine v3.0 356
AutoFact: histone-like protein [Fritillaria liliacea] 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 1.813e-26
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain