Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene982 SustainPine v3.0 2696
AutoFact: Transcriptional corepressor SEUSS, putative n=1 Tax=Ricinus communis RepID=B9S2M5_RICCO 0.0
FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor SEUSS, putative 8.684e-18
C-terminus
sp_v3.0_unigene983 SustainPine v3.0 3457
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 1.535e-15
Putative Complete
sp_v3.0_unigene1016 SustainPine v3.0 1441
AutoFact: putative MYB transcription factor [Gossypium hirsutum] 3.0e-23
FL-Next: sp=Putative Myb family transcription factor At1g14600; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transfactor-like protein 4.79e-09
Complete
sp_v3.0_unigene1037 SustainPine v3.0 1372
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AAC98030.1| ESTs gb|234051 and gb|F13722 come from this gene [Arabidopsis thaliana] gb|AAM62726.1| unknown [Arabidopsis thaliana] gb|AAO22770.1| unknown protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OB-fold nucleic acid binding domain containing protein 6.005e-15
Complete
sp_v3.0_unigene1055 SustainPine v3.0 2313
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 1.346e-12
Complete
sp_v3.0_unigene1098 SustainPine v3.0 642
AutoFact: MYB transcription factor n=1 Tax=Arabidopsis thaliana RepID=Q8GW75_ARATH 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative myb family transcription factor 2.847e-07
Complete
sp_v3.0_unigene1102 SustainPine v3.0 1740
AutoFact: R2R3-MYB transcription factor MYB7 n=2 Tax=Pinaceae RepID=Q27IP0_PINTA 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB7; Pinus taeda (Loblolly pine). 0.0
Sma3: R2R3-MYB transcription factor MYB7 0.0
Complete
sp_v3.0_unigene1105 SustainPine v3.0 1333
AutoFact: zinc finger protein [Zea mays] gb|ABS83244.1| AN13 [Zea mays] gb|ACG36018.1| zinc finger A20 and AN1 domains-containing protein [Zea mays] gb|ACG48526.1| zinc finger A20 and AN1 domains-containing protein [Zea mays] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger A20 and AN1 domains-containing protein 1.304e-07
Complete
sp_v3.0_unigene1116 SustainPine v3.0 3118
AutoFact: aspartyl protease family protein [Arabidopsis thaliana] gb|AED94910.1| aspartyl protease family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aspartic proteinase nepenthesin-1, putative 1.086e-06
Complete
sp_v3.0_unigene1146 SustainPine v3.0 1844
AutoFact: RecName: Full=Cytochrome P450 71A1; AltName: Full=ARP-2; AltName: Full=CYPLXXIA1 gb|AAA32913.1| cytochrome P-450LXXIA1 (cyp71A1) [Persea americana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 1.847e-28
C-terminus
sp_v3.0_unigene1152 SustainPine v3.0 1130
AutoFact: DNA polymerase alpha 2 [Arabidopsis thaliana] gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Alpha DNA polymerase, putative 5.848e-06
C-terminus
sp_v3.0_unigene1165 SustainPine v3.0 2684
AutoFact: duplicated SANT DNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB10001.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59913.1| unknown protein [Arabidopsis thaliana] gb|AAM20221.1| unknown protein [Arabidopsis thaliana] gb|AAS1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 9.804e-21
Complete
sp_v3.0_unigene1168 SustainPine v3.0 1919
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 7.882e-12
C-terminus
sp_v3.0_unigene1183 SustainPine v3.0 1207
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene1191 SustainPine v3.0 2321
AutoFact: SMC_N domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1198 SustainPine v3.0 1590
AutoFact: Cinnamoyl CoA reductase n=7 Tax=Populus RepID=B2Z6Q2_POPTR 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Sma3: Cinnamoyl-CoA reductase 1.4013e-45
Complete
sp_v3.0_unigene1204 SustainPine v3.0 1326
AutoFact: NAM-like protein [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene1206 SustainPine v3.0 790
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene1225 SustainPine v3.0 2360
AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.554e-35
Putative Complete
sp_v3.0_unigene1274 SustainPine v3.0 2626
AutoFact: Mitogen-activated protein kinase kinase kinase n=3 Tax=Vitis vinifera RepID=A0PGA1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 4.761e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain