Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1414 SustainPine v3.0 2039
AutoFact: Piwi multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Argonaute protein group 6.25e-19
Complete
sp_v3.0_unigene1419 SustainPine v3.0 4284
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1424 SustainPine v3.0 913
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S832_PHYPA 5.0e-19
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.006e-09
Internal
sp_v3.0_unigene1431 SustainPine v3.0 7160
AutoFact: gag-pol polyprotein [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 2.535e-09
Complete
sp_v3.0_unigene1434 SustainPine v3.0 4023
AutoFact: B3 multi-domain protein 6.0e-16
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene1435 SustainPine v3.0 3375
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EIN3-binding F-box protein 1 2.315e-13
Complete
sp_v3.0_unigene1443 SustainPine v3.0 3458
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 7, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Cell division protein ftsH, putative 1.876e-14
Complete
sp_v3.0_unigene1449 SustainPine v3.0 1927
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.346e-14
Putative Complete
sp_v3.0_unigene1484 SustainPine v3.0 3200
AutoFact: putative poly(A) polymerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polynucleotide adenylyltransferase 1.803e-11
Putative Complete
sp_v3.0_unigene1486 SustainPine v3.0 1317
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative histone H1 0.0
Complete
sp_v3.0_unigene1496 SustainPine v3.0 1132
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9H2N0_POPTR 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.272e-39
C-terminus
sp_v3.0_unigene1500 SustainPine v3.0 1361
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene1530 SustainPine v3.0 2543
AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RXH5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 2.002e-10
Complete
sp_v3.0_unigene1531 SustainPine v3.0 1548
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Facilitates chromatin transcription complex subunit SPT16 7.448e-13
Complete
sp_v3.0_unigene1544 SustainPine v3.0 3990
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1548 SustainPine v3.0 1829
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene1558 SustainPine v3.0 638
AutoFact: Myc-like anthocyanin regulatory protein n=2 Tax=Cornus RepID=Q675M4_CORAT 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative anthocyanin transcriptional regulator 3.793e-24
C-terminus
sp_v3.0_unigene1567 SustainPine v3.0 3892
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1568 SustainPine v3.0 3619
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene1575 SustainPine v3.0 2462
AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone ubiquitination proteins group 1.374e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain