Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1154 SustainPine v3.0 1425
• AutoFact: auxin-responsive protein IAA33 [Arabidopsis thaliana] sp|Q9FKM7.1|IAA33_ARATH RecName: Full=Auxin-responsive protein IAA33; AltName: Full=Indoleacetic acid-induced protein 33 dbj|BAB08779.1| unnamed protein product [Arabidopsis thaliana] gb|AAT67088.1| IA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1157 SustainPine v3.0 1254
• AutoFact: translation initiation factor eIF-5 [Arabidopsis thaliana] sp|Q9S825.1|IF5Z_ARATH RecName: Full=Probable eukaryotic translation initiation factor 5-2; Short=eIF-5 2 gb|AAF17676.1|AC009243_3 F28K19.5 [Arabidopsis thaliana] gb|AAG51628.1|AC012193_10 putativ 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1165 SustainPine v3.0 2684
• AutoFact: duplicated SANT DNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB10001.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59913.1| unknown protein [Arabidopsis thaliana] gb|AAM20221.1| unknown protein [Arabidopsis thaliana] gb|AAS1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 9.804e-21
Complete
sp_v3.0_unigene1183 SustainPine v3.0 1207
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene1184 SustainPine v3.0 2385
• AutoFact: rRNA processing protein-like protein [Arabidopsis thaliana] dbj|BAB08488.1| unnamed protein product [Arabidopsis thaliana] dbj|BAE99623.1| hypothetical protein [Arabidopsis thaliana] gb|AED97455.1| rRNA processing protein-like protein [Arabidopsis thalian 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene1191 SustainPine v3.0 2321
• AutoFact: SMC_N domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1204 SustainPine v3.0 1326
• AutoFact: NAM-like protein [Prunus persica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene1206 SustainPine v3.0 790
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene1219 SustainPine v3.0 3115
• AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9R931_RICCO 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Calcium-dependent protein kinase 0.0
Complete
sp_v3.0_unigene1225 SustainPine v3.0 2360
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.554e-35
Putative Complete
sp_v3.0_unigene1241 SustainPine v3.0 3153
• AutoFact: replication protein A 30kDa [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative replication factor A 4.155e-08
Complete
sp_v3.0_unigene1254 SustainPine v3.0 1170
• AutoFact: Water deficit inducible protein LP3-3 (Fragment) n=4 Tax=Pinus taeda RepID=Q41095_PINTA 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abscisic stress ripening protein 2.519e-16
Complete
sp_v3.0_unigene1274 SustainPine v3.0 2626
• AutoFact: Mitogen-activated protein kinase kinase kinase n=3 Tax=Vitis vinifera RepID=A0PGA1_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 4.761e-13
C-terminus
sp_v3.0_unigene1346 SustainPine v3.0 2998
• AutoFact: putative protein kinase [Arabidopsis thaliana] gb|AAC04483.1| putative protein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Kinase, putative 1.402e-25
Complete
sp_v3.0_unigene1365 SustainPine v3.0 3400
• AutoFact: Phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9S0D1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphatidylinositol-4-phosphate 5-kinase, putative 9.168e-20
Complete
sp_v3.0_unigene1375 SustainPine v3.0 1465
• AutoFact: Cyclin d, putative n=1 Tax=Ricinus communis RepID=B9R768_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: D3-type cyclin 2.771e-17
Putative C-terminus
sp_v3.0_unigene1387 SustainPine v3.0 2188
• AutoFact: Condensin complex subunit 2 n=1 Tax=Arabidopsis thaliana RepID=Q564K3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome condensation complex condensin, subunit H 9.277e-10
Complete
sp_v3.0_unigene1388 SustainPine v3.0 2819
• AutoFact: Beta-tubulin cofactor d, putative n=1 Tax=Ricinus communis RepID=B9RD93_RICCO 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene1408 SustainPine v3.0 1758
• AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Flap endonuclease 1-A; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene1410 SustainPine v3.0 2138
• AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA polymerase epsilon subunit B-like protein 2.207e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain