Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene894 SustainPine v3.0 2360
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein GT-1 3.335e-09
Complete
sp_v3.0_unigene906 SustainPine v3.0 2486
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA transcription factor 25 8.65e-15
Complete
sp_v3.0_unigene907 SustainPine v3.0 1797
• AutoFact: bZIP transcription factor bZIP50 [Glycine max] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene911 SustainPine v3.0 1152
• AutoFact: Gc-rich sequence DNA-binding factor, putative n=1 Tax=Ricinus communis RepID=B9RGK2_RICCO 9.99995e-41
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene917 SustainPine v3.0 2119
• AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCD7_RICCO 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 3.36e-07
Putative Complete
sp_v3.0_unigene931 SustainPine v3.0 2101
• AutoFact: Cyclin-T1-4 n=2 Tax=Oryza sativa Japonica Group RepID=CCT14_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycT1 4.6e-35
Complete
sp_v3.0_unigene964 SustainPine v3.0 2041
• AutoFact: DRE-binding protein DREB1 n=1 Tax=Cymbidium insigne RepID=A6YT27_9ASPA 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene969 SustainPine v3.0 2206
• AutoFact: Heat shock transcription factor (HSF) [Glycine max] 1.4013e-45
• FL-Next: sp=Heat stress transcription factor B-4d; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Heat shock factor protein, putative 4.809e-12
Complete
sp_v3.0_unigene982 SustainPine v3.0 2696
• AutoFact: Transcriptional corepressor SEUSS, putative n=1 Tax=Ricinus communis RepID=B9S2M5_RICCO 0.0
• FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor SEUSS, putative 8.684e-18
C-terminus
sp_v3.0_unigene983 SustainPine v3.0 3457
• AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 1.535e-15
Putative Complete
sp_v3.0_unigene993 SustainPine v3.0 1055
• AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 3.762e-16
Complete
sp_v3.0_unigene999 SustainPine v3.0 2098
• AutoFact: [R] COG2940 Proteins containing SET domain 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1007 SustainPine v3.0 1726
• AutoFact: putative WRKY transcription factor 14 [Arabidopsis thaliana] sp|Q9SA80.2|WRK14_ARATH RecName: Full=Probable WRKY transcription factor 14; AltName: Full=AR411; AltName: Full=WRKY DNA-binding protein 14 gb|AAP21276.1| At1g30650 [Arabidopsis thaliana] dbj|BA 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 1.808e-11
C-terminus
sp_v3.0_unigene1010 SustainPine v3.0 1742
• AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1016 SustainPine v3.0 1441
• AutoFact: putative MYB transcription factor [Gossypium hirsutum] 3.0e-23
• FL-Next: sp=Putative Myb family transcription factor At1g14600; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transfactor-like protein 4.79e-09
Complete
sp_v3.0_unigene1080 SustainPine v3.0 1884
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene1094 SustainPine v3.0 3005
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 6.356e-15
Putative Complete
sp_v3.0_unigene1098 SustainPine v3.0 642
• AutoFact: MYB transcription factor n=1 Tax=Arabidopsis thaliana RepID=Q8GW75_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative myb family transcription factor 2.847e-07
Complete
sp_v3.0_unigene1102 SustainPine v3.0 1740
• AutoFact: R2R3-MYB transcription factor MYB7 n=2 Tax=Pinaceae RepID=Q27IP0_PINTA 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB7; Pinus taeda (Loblolly pine). 0.0
• Sma3: R2R3-MYB transcription factor MYB7 0.0
Complete
sp_v3.0_unigene1152 SustainPine v3.0 1130
• AutoFact: DNA polymerase alpha 2 [Arabidopsis thaliana] gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana] 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Alpha DNA polymerase, putative 5.848e-06
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain