Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome

Term: GO:0000786  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20917 SustainPine v3.0 966
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene20990 SustainPine v3.0 851
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.465e-36
C-terminus
sp_v3.0_unigene21079 SustainPine v3.0 928
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21133 SustainPine v3.0 673
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21267 SustainPine v3.0 724
AutoFact: histone H4 [Hyacinthus orientalis] 8.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene21272 SustainPine v3.0 1003
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene21277 SustainPine v3.0 412
AutoFact: histone H4 [Hyacinthus orientalis] 7.0e-37
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Putative Complete
sp_v3.0_unigene21298 SustainPine v3.0 832
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene21415 SustainPine v3.0 774
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene21455 SustainPine v3.0 737
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21461 SustainPine v3.0 529
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21477 SustainPine v3.0 567
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene21481 SustainPine v3.0 422
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene21489 SustainPine v3.0 882
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene21492 SustainPine v3.0 842
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene21514 SustainPine v3.0 523
AutoFact: GF20391 n=4 Tax=Coelomata RepID=B3N2H1_DROAN 9.0e-36
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene21543 SustainPine v3.0 769
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q00YS0_OSTTA 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21547 SustainPine v3.0 648
AutoFact: Histone H3 n=1 Tax=Harpegnathos saltator RepID=E2BMC4_9HYME 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21615 SustainPine v3.0 839
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21632 SustainPine v3.0 615
AutoFact: PREDICTED: histone cluster 1, H3f-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE22F8 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain