Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome

Term: GO:0000786  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene150692 SustainPine v3.0 329
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6110 1.99993e-41
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene150823 SustainPine v3.0 376
AutoFact: Histone H2A.V n=6 Tax=Chromadorea RepID=H2AV_CAEEL 1.96182e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene150881 SustainPine v3.0 356
AutoFact: Ribosomal protein L37 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDA7_PHYIT 5.0e-37
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene150921 SustainPine v3.0 296
AutoFact: Histone H4, major n=31 Tax=Oligohymenophorea RepID=H41_TETPY 6.0e-31
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.127e-11
C-terminus
sp_v3.0_unigene150938 SustainPine v3.0 473
AutoFact: Histone H2B n=1 Tax=Moneuplotes crassus RepID=H2B_EUPCR 7.0e-39
FL-Next: sp=Histone H2B; Olisthodiscus luteus (Marine phytoflagellate) (Heterosigma akashiwo). 0.0
Sma3: Histone H2B 1.232e-34
Complete
sp_v3.0_unigene150969 SustainPine v3.0 376
AutoFact: Histone H3 n=1 Tax=Chlorella variabilis RepID=E1ZRC8_9CHLO 3.0e-32
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene151042 SustainPine v3.0 334
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6110 4.06377e-44
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene151562 SustainPine v3.0 551
AutoFact: Ribosomal protein L37 n=2 Tax=Sclerotiniaceae RepID=A7F605_SCLS1 4.0e-36
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene151747 SustainPine v3.0 277
AutoFact: Ribosomal protein L37 n=1 Tax=Adineta ricciae RepID=Q56J85_ADIRI 3.0e-25
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene151780 SustainPine v3.0 434
AutoFact: Histone H2A (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZYM2_BRAFL 9.80909e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene151906 SustainPine v3.0 458
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6110 9.00054e-42
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene151955 SustainPine v3.0 389
AutoFact: FKBP-type peptidylprolyl cis-trans isomerase n=1 Tax=Polysphondylium pallidum RepID=D3B9X0_POLPA 5.0e-34
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 9.821e-18
C-terminus
sp_v3.0_unigene151962 SustainPine v3.0 515
AutoFact: PREDICTED: histone cluster 2, H3c2-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF3AD8 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene151977 SustainPine v3.0 453
AutoFact: histone H4 [Hyacinthus orientalis] 9.99995e-41
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.338e-11
Complete
sp_v3.0_unigene152012 SustainPine v3.0 488
AutoFact: Histone H3 n=1 Tax=Culex quinquefasciatus RepID=B0WZ74_CULQU 9.99995e-41
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3.2 0.0
Complete
sp_v3.0_unigene152025 SustainPine v3.0 498
AutoFact: Histone H3 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QZU5_CRYGW 5.0e-29
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene152026 SustainPine v3.0 318
AutoFact: Ribosomal protein L37 n=1 Tax=Micromonas sp. RCC299 RepID=C1E0E5_MICSR 2.0e-33
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene152046 SustainPine v3.0 293
AutoFact: Histone H3 n=1 Tax=Polysphondylium pallidum RepID=D3BBJ8_POLPA 3.0e-35
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene152159 SustainPine v3.0 469
AutoFact: Ribosomal protein L37 n=1 Tax=Branchiostoma floridae RepID=C3YCM1_BRAFL 3.0e-28
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene152306 SustainPine v3.0 298
AutoFact: Ribosomal protein L37 n=1 Tax=Zea mays RepID=B6SJJ8_MAIZE 7.0e-29
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain