Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome

Term: GO:0000786  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene68501 SustainPine v3.0 285
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 2.432e-38
Putative N-terminus
sp_v3.0_unigene68846 SustainPine v3.0 302
AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.877e-36
C-terminus
sp_v3.0_unigene68992 SustainPine v3.0 256
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 6.727e-28
N-terminus
sp_v3.0_unigene69106 SustainPine v3.0 225
AutoFact: Histone H2A n=2 Tax=rosids RepID=E3NYV0_9FABA 1.0e-07
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene69154 SustainPine v3.0 243
AutoFact: Histone H3 n=1 Tax=Oryza sativa Japonica Group RepID=C7J3T3_ORYSJ 5.0e-21
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 5.75e-19
N-terminus
sp_v3.0_unigene69443 SustainPine v3.0 226
AutoFact: Histone H3 n=1 Tax=Chlorella variabilis RepID=E1ZRC8_9CHLO 7.0e-08
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 2.865e-07
Putative N-terminus
sp_v3.0_unigene69616 SustainPine v3.0 226
AutoFact: Histone H2B.1 n=10 Tax=Magnoliophyta RepID=H2B1_ORYSJ 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 4.878e-28
Internal
sp_v3.0_unigene69617 SustainPine v3.0 178
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.265e-16
Putative N-terminus
sp_v3.0_unigene70374 SustainPine v3.0 392
AutoFact: GF20391 n=4 Tax=Coelomata RepID=B3N2H1_DROAN 1.0e-12
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 9.018e-12
C-terminus
sp_v3.0_unigene70732 SustainPine v3.0 380
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 5.0e-09
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 1.093e-16
N-terminus
sp_v3.0_unigene70839 SustainPine v3.0 243
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 7.0e-10
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 3.979e-33
N-terminus
sp_v3.0_unigene71375 SustainPine v3.0 213
AutoFact: Histone H2A n=1 Tax=Chlorella variabilis RepID=E1Z345_9CHLO 8.0e-08
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 2.71e-06
Internal
sp_v3.0_unigene71612 SustainPine v3.0 170
AutoFact: Histone H2A n=2 Tax=Chlamydomonadales RepID=A8HRZ9_CHLRE 4.0e-15
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene71645 SustainPine v3.0 219
AutoFact: Histone H2B n=2 Tax=Volvox carteri f. nagariensis RepID=D8TP19_VOLCA 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 6.466e-37
C-terminus
sp_v3.0_unigene72150 SustainPine v3.0 418
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 2.45227e-43
Putative N-terminus
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene72739 SustainPine v3.0 160
AutoFact: Histone H2B n=1 Tax=Chlamydomonas sp. ICE-L RepID=E5G3R1_9CHLO 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 5.539e-30
C-terminus
sp_v3.0_unigene73135 SustainPine v3.0 268
AutoFact: histone-like protein [Fritillaria liliacea] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Internal
sp_v3.0_unigene74094 SustainPine v3.0 440
AutoFact: Histone H3 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXR9_COPC7 3.0e-23
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene74218 SustainPine v3.0 344
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=D7KSR1_ARALL 4.0e-06
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain