Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene43 SustainPine v3.0 867
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene239 SustainPine v3.0 3061
AutoFact: Probable carboxylesterase 11 n=2 Tax=Arabidopsis RepID=CXE11_ARATH 0.0
FL-Next: tr=PrMC3; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: CXE carboxylesterase 1.5e-06
Complete
sp_v3.0_unigene508 SustainPine v3.0 926
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene601 SustainPine v3.0 877
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene605 SustainPine v3.0 2352
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Transcription factor bHLH49; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 8.684e-15
Complete
sp_v3.0_unigene835 SustainPine v3.0 731
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene871 SustainPine v3.0 1276
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene1183 SustainPine v3.0 1207
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene1206 SustainPine v3.0 790
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene1305 SustainPine v3.0 1300
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 8.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene1708 SustainPine v3.0 889
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 5.00264e-43
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene2081 SustainPine v3.0 2345
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene2150 SustainPine v3.0 493
AutoFact: Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana] sp|Q9LG26.2|PARN_ARATH RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Polyadenylate-specific ribonuclease; Short=AtPARN; AltName: Full=Protein ABA hypersensitive germination 2 dbj| 1.0e-31
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene2674 SustainPine v3.0 1064
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 5.00264e-43
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.098e-33
Putative Complete
sp_v3.0_unigene2749 SustainPine v3.0 1000
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene3643 SustainPine v3.0 1276
AutoFact: transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana] gb|AAF65405.1|AF238326_1 putative TATA binding protein associated factor 24kDa subunit [Arabidopsis thaliana] gb|AAK43956.1|AF370141_1 unknown protein [Arabidopsis thaliana] gb|AAK937 2.0e-37
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: Transcription initiation factor TFIID subunit 11 2.166e-09
Complete
sp_v3.0_unigene4155 SustainPine v3.0 2052
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Repressor protein 4.391e-11
Complete
sp_v3.0_unigene4307 SustainPine v3.0 495
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-39
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene4452 SustainPine v3.0 805
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 0.0
Complete
sp_v3.0_unigene4454 SustainPine v3.0 887
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-32
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain