Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation

Term: GO:0006412  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6455 SustainPine v3.0 4010
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA polymerase II transcription elongation factor SPT5 8.893e-09
Complete
sp_v3.0_unigene6473 SustainPine v3.0 1210
• AutoFact: peptidyl-tRNA hydrolase 2 [Xenopus (Silurana) tropicalis] 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6509 SustainPine v3.0 1287
• AutoFact: Peptidyl-tRNA hydrolase [Arabidopsis thaliana] sp|Q6NLS8.1|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName: Full=M-PTH; AltName: Full=Mitochondrial CRS2-like protein; AltName: Full=Mitochondrial RNA splicing factor; Flags: Precurs 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6611 SustainPine v3.0 1821
• AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi 7.0e-32
• FL-Next: sp=50S ribosomal protein L12, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L7/L12, putative 3.722e-12
Complete
sp_v3.0_unigene6633 SustainPine v3.0 1340
• AutoFact: ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] ref|NP_001185360.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] gb|AAK25833.1|AF360123_1 unknown protein [Arabidopsis thaliana] gb|AAB61098.1| Similar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L7/L12, putative 3.002e-12
Complete
sp_v3.0_unigene6688 SustainPine v3.0 1584
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6848 SustainPine v3.0 782
• AutoFact: PREDICTED: similar to LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Vitis vinifera RepID=UPI00019828C8 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex 2.95e-07
Putative N-terminus
sp_v3.0_unigene6852 SustainPine v3.0 872
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene6861 SustainPine v3.0 1885
• AutoFact: 50S ribosomal protein L3-2 [Arabidopsis thaliana] sp|Q9LRN8.1|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags: Precursor dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gb|AEE75957.1| 50S ribosomal protein L3-2 [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6894 SustainPine v3.0 1823
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
Putative Complete
sp_v3.0_unigene6905 SustainPine v3.0 1332
• AutoFact: Amidase, putative [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamyl-tRNA(Gln) amidotransferase subunit A, putative 1.875e-14
Putative C-terminus
sp_v3.0_unigene7117 SustainPine v3.0 5290
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Fip1 motif containing protein 7.797e-06
Putative Complete
sp_v3.0_unigene7146 SustainPine v3.0 2322
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7385 SustainPine v3.0 1410
• AutoFact: Ribosomal protein L36 n=1 Tax=Picea sitchensis RepID=A9NJT6_PICSI 4.0e-34
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L36 0.0
Complete
sp_v3.0_unigene7387 SustainPine v3.0 1552
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Complete
sp_v3.0_unigene7668 SustainPine v3.0 905
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Putative uncharacterized protein P0680C01.9 6.335e-06
C-terminus
sp_v3.0_unigene7906 SustainPine v3.0 1396
• AutoFact: 50S ribosomal protein L15, putative n=1 Tax=Ricinus communis RepID=B9T052_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7965 SustainPine v3.0 2286
• AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF3a 1.157e-13
Putative Complete
sp_v3.0_unigene8165 SustainPine v3.0 2503
• AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=30S ribosomal protein S5, chloroplastic; Odontella sinensis (Marine centric diatom) (Biddulphia sinensis). Plastid; Chloroplast. 0.0
Complete
sp_v3.0_unigene8387 SustainPine v3.0 1314
• AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain