Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2465 SustainPine v3.0 1573
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene2475 SustainPine v3.0 1432
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2651 SustainPine v3.0 1546
AutoFact: 50S ribosomal protein L3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2728 SustainPine v3.0 1154
AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 0.0
FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L19 0.0
Complete
sp_v3.0_unigene2765 SustainPine v3.0 1221
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2842 SustainPine v3.0 980
AutoFact: 60S ribosomal protein L34, putative [Solanum demissum] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L34 1.848e-10
N-terminus
sp_v3.0_unigene2844 SustainPine v3.0 1344
AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene2918 SustainPine v3.0 550
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.156e-11
C-terminus
sp_v3.0_unigene3015 SustainPine v3.0 1411
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.79e-08
Complete
sp_v3.0_unigene3024 SustainPine v3.0 653
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S11 9.465e-21
N-terminus
sp_v3.0_unigene3130 SustainPine v3.0 1552
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene3271 SustainPine v3.0 3137
AutoFact: mamallian P58IPK-like protein [Arabidopsis thaliana] emb|CAB86083.1| putative protein [Arabidopsis thaliana] dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] gb|AAM62560.1| unknown [Arabidopsis thaliana] gb|AED90562.1| mamall 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.62e-20
Complete
sp_v3.0_unigene3311 SustainPine v3.0 1241
AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 0.0
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene3466 SustainPine v3.0 937
AutoFact: ribosomal protein-like [Oryza sativa Japonica Group] dbj|BAD36138.1| ribosomal protein-like [Oryza sativa Japonica Group] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3521 SustainPine v3.0 1014
AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3526 SustainPine v3.0 2395
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 1.744e-11
Complete
sp_v3.0_unigene3541 SustainPine v3.0 1013
AutoFact: RecName: Full=Acid phosphatase 1; AltName: Full=Apase-1(1); Flags: Precursor gb|AAA34134.1| acid phosphatase type 1 precursor [Solanum lycopersicum] gb|AAA34135.1| acid phosphatase type 5 [Solanum lycopersicum] emb|CAA39370.1| acid phosphatase [Solanum ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative acid phosphatase 1.97e-25
Complete
sp_v3.0_unigene3584 SustainPine v3.0 1200
AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3608 SustainPine v3.0 854
AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3610 SustainPine v3.0 1037
AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain