Sustainpine_db
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Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11 SustainPine v3.0 1405
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene77 SustainPine v3.0 1222
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative Complete
sp_v3.0_unigene79 SustainPine v3.0 2456
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene158 SustainPine v3.0 1536
AutoFact: ribosomal protein L19 [Arabidopsis thaliana] emb|CAB39934.1| putative protein [Arabidopsis thaliana] emb|CAB78206.1| putative protein [Arabidopsis thaliana] gb|AAS76282.1| At4g11630 [Arabidopsis thaliana] dbj|BAD94523.1| putative protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L19, putative 9.54e-13
Complete
sp_v3.0_unigene162 SustainPine v3.0 3761
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 5.308e-09
C-terminus
sp_v3.0_unigene334 SustainPine v3.0 1304
AutoFact: 60S ribosomal protein L28, putative n=1 Tax=Ricinus communis RepID=B9RKC5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene347 SustainPine v3.0 2382
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 4.857e-18
Complete
sp_v3.0_unigene350 SustainPine v3.0 1553
AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 0.0
FL-Next: sp=50S ribosomal protein L2, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein L2 0.0
Putative Complete
sp_v3.0_unigene454 SustainPine v3.0 1808
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene475 SustainPine v3.0 1843
AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene540 SustainPine v3.0 1099
AutoFact: 60S ribosomal protein L22-2 [Arabidopsis thaliana] ref|NP_974229.1| 60S ribosomal protein L22-2 [Arabidopsis thaliana] ref|NP_001078112.1| 60S ribosomal protein L22-2 [Arabidopsis thaliana] sp|Q9M9W1.1|RL222_ARATH RecName: Full=60S ribosomal protein L22-2 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene602 SustainPine v3.0 4108
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Trehalose-6-phosphate synthase, putative 2.728e-24
Complete
sp_v3.0_unigene659 SustainPine v3.0 1045
AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-38
FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene789 SustainPine v3.0 3029
AutoFact: protein phosphatase 2c, putative (EC:3.1.3.16) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene811 SustainPine v3.0 872
AutoFact: 60S ribosomal protein L44 [Phalaenopsis hybrid cultivar] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene814 SustainPine v3.0 1338
AutoFact: 60S ribosomal protein L15-1 n=8 Tax=Embryophyta RepID=RL15A_PICMA 0.0
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
Complete
sp_v3.0_unigene929 SustainPine v3.0 1130
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=D5ADT3_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os10g0579500 protein 8.285e-06
Complete
sp_v3.0_unigene1071 SustainPine v3.0 1086
AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1128 SustainPine v3.0 1486
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1349 SustainPine v3.0 1380
AutoFact: 60S ribosomal protein L9-1 [Arabidopsis thaliana] ref|NP_564418.1| 60S ribosomal protein L9-1 [Arabidopsis thaliana] sp|P49209.3|RL91_ARATH RecName: Full=60S ribosomal protein L9-1 gb|AAF97345.1|AC021045_2 Putative 60S ribosomal protein L9 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain