Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene208489 SustainPine v3.0 1000
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene208500 SustainPine v3.0 629
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.751e-08
Putative Complete
sp_v3.0_unigene208501 SustainPine v3.0 659
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Hexameric polyubiquitin 6PU11; Capsicum annuum (Bell pepper). 0.0
• Sma3: Polyubiquitin 1.014e-07
Complete
sp_v3.0_unigene208520 SustainPine v3.0 483
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene208545 SustainPine v3.0 1074
• AutoFact: Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI 2.0e-33
• FL-Next: tr=Ribosomal protein S3; Abies holophylla (Neddle fir) (Manchurian fir). Mitochondrion. 0.0
• Sma3: Ribosomal protein S3 0.0
Putative N-terminus
sp_v3.0_unigene208546 SustainPine v3.0 781
• AutoFact: heat shock protein 81-1 [Arabidopsis thaliana] dbj|BAA98082.1| heat-shock protein [Arabidopsis thaliana] gb|AAM91104.1| AT5g52640/F6N7_13 [Arabidopsis thaliana] gb|AAN46890.1| At5g52640/F6N7_13 [Arabidopsis thaliana] gb|AED96244.1| heat shock protein 81-1 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene208599 SustainPine v3.0 303
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
N-terminus
sp_v3.0_unigene208621 SustainPine v3.0 575
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.444e-28
Internal
sp_v3.0_unigene208898 SustainPine v3.0 188
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.086e-11
N-terminus
sp_v3.0_unigene208920 SustainPine v3.0 227
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene208962 SustainPine v3.0 549
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 6.0e-23
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 5.669e-09
Complete
sp_v3.0_unigene208977 SustainPine v3.0 596
• AutoFact: 50S ribosomal protein L31 n=1 Tax=Picea sitchensis RepID=A9NXG1_PICSI 0.0
• FL-Next: sp=50S ribosomal protein L31; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L31 0.0
Putative Complete
sp_v3.0_unigene209004 SustainPine v3.0 362
• AutoFact: Heat shock protein, putative n=1 Tax=Ricinus communis RepID=B9RCG8_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 90 0.0
N-terminus
sp_v3.0_unigene209051 SustainPine v3.0 507
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 4.00001e-40
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 2.8e-18
C-terminus
sp_v3.0_unigene209077 SustainPine v3.0 444
• AutoFact: [J] COG2163 Ribosomal protein L14E/L6E/L27E 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 3.872e-16
N-terminus
sp_v3.0_unigene209193 SustainPine v3.0 921
• AutoFact: 60S ribosomal protein L18a n=23 Tax=Magnoliophyta RepID=RL18A_ORYSJ 0.0
• FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene209196 SustainPine v3.0 811
• AutoFact: EMP70 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endomembrane protein 70 containing protein, expressed 8.518e-12
Internal
sp_v3.0_unigene209202 SustainPine v3.0 589
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Polyubiquitin 1.003e-07
Putative Complete
sp_v3.0_unigene209209 SustainPine v3.0 520
• AutoFact: Ribosomal protein L30 n=3 Tax=Medicago truncatula RepID=Q2HVI3_MEDTR 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.272e-07
N-terminus
sp_v3.0_unigene209241 SustainPine v3.0 170
• AutoFact: Ribosomal protein S7 n=1 Tax=Elaeis guineensis RepID=B3TM44_ELAGV 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.643e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain