Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1746 SustainPine v3.0 1416
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.378e-11
Complete
sp_v3.0_unigene1749 SustainPine v3.0 1029
• AutoFact: protein S-DOMAIN-2 5 [Arabidopsis thaliana] sp|Q8RWZ5.1|SD25_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5; AltName: Full=S-domain-2 (SD2) receptor kinase 5; Short=SD2-5; Flags: Precursor gb|AAM14032.1| putative S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative S-domain receptor-like protein kinase 3.087e-18
Putative C-terminus
sp_v3.0_unigene1755 SustainPine v3.0 2138
• AutoFact: Cyclin n=1 Tax=Adiantum capillus-veneris RepID=Q96226_ADICA 0.0
• FL-Next: sp=Cyclin-A1-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cyclin A-like protein 8.273e-20
Complete
sp_v3.0_unigene1767 SustainPine v3.0 1981
• AutoFact: serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gb|AEE79109.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Afc, putative 1.098e-15
Putative Complete
sp_v3.0_unigene1769 SustainPine v3.0 1496
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAW80858.1| At5g45290 [Arabidopsis thaliana] gb|AAW80870.1| At5g45290 [Arabidopsis thaliana] gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.133e-12
C-terminus
sp_v3.0_unigene1771 SustainPine v3.0 3231
• AutoFact: PREDICTED: similar to nitrate reductase n=1 Tax=Vitis vinifera RepID=UPI00019854B3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nitrate reductase 0.0
Complete
sp_v3.0_unigene1796 SustainPine v3.0 1187
• AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U1 small nuclear ribonucleoprotein 5.633e-12
Complete
sp_v3.0_unigene1797 SustainPine v3.0 2801
• AutoFact: Sorting nexin-4, putative n=1 Tax=Ricinus communis RepID=B9RRH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1800 SustainPine v3.0 1028
• AutoFact: RING/U-box domain-containing protein n=4 Tax=Arabidopsis RepID=F4JWA1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1806 SustainPine v3.0 2512
• AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, Mutator sub-class, expressed 3.312e-13
Complete
sp_v3.0_unigene1807 SustainPine v3.0 1343
• AutoFact: papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] 1.0e-36
• FL-Next: tr=Pseudotzain; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Cysteine proteinase 4.606e-19
C-terminus
sp_v3.0_unigene1815 SustainPine v3.0 377
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
• FL-Next: sp=Putative pumilio homolog 8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pumilio-family RNA binding repeat containing protein, expressed 1.305e-11
Internal
sp_v3.0_unigene1820 SustainPine v3.0 838
• AutoFact: Drf_FH1 multi-domain protein 6.0e-18
coding
sp_v3.0_unigene1822 SustainPine v3.0 3048
• AutoFact: U-box multi-domain protein 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 1.27e-10
Complete
sp_v3.0_unigene1838 SustainPine v3.0 4729
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS8_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Complete
sp_v3.0_unigene1847 SustainPine v3.0 1903
• AutoFact: CBL-interacting protein kinase 16 n=2 Tax=Vitis vinifera RepID=C4P7W5_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CBL-interacting serine/threonine-protein kinase, putative 6.752e-38
Complete
sp_v3.0_unigene1854 SustainPine v3.0 4888
• AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AAL36370.1| unknown protein [Arabidopsis thaliana] gb|AAM20286.1| unknown protein [Arabidopsis thaliana] gb|AEE84863.1| Transcription elongation factor (TFIIS) family protein 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1868 SustainPine v3.0 2576
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: U1 snRNP 3.506e-09
Complete
sp_v3.0_unigene1869 SustainPine v3.0 2047
• AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U1 snRNP 9.17e-09
Putative Complete
sp_v3.0_unigene1870 SustainPine v3.0 2573
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.86e-13
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain