Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene820 SustainPine v3.0 2093
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 2.0e-13
FL-Next: sp=Putative E3 ubiquitin-protein ligase RF298; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene821 SustainPine v3.0 1917
AutoFact: PHD domain containing protein 1.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene849 SustainPine v3.0 4228
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor-like kinase RHG4 1.014e-07
Complete
sp_v3.0_unigene865 SustainPine v3.0 2578
AutoFact: MORN domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein Sb01g028730; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: ICE-like protease p20 domain containing protein, expressed 4.92e-12
Complete
sp_v3.0_unigene878 SustainPine v3.0 1323
AutoFact: DEMETER protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Repressor of silencing 1 6.505e-09
C-terminus
sp_v3.0_unigene901 SustainPine v3.0 1966
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene908 SustainPine v3.0 1654
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRC0_RICCO 0.0
FL-Next: sp=Kinesin-like calmodulin-binding protein homolog; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Kinesin-like calmodulin binding protein 1.919e-12
N-terminus
sp_v3.0_unigene917 SustainPine v3.0 2119
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCD7_RICCO 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.36e-07
Putative Complete
sp_v3.0_unigene925 SustainPine v3.0 2574
AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene926 SustainPine v3.0 3533
AutoFact: hercules receptor kinase 2 [Arabidopsis thaliana] sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FERONIA receptor-like kinase 5.817e-18
Complete
sp_v3.0_unigene931 SustainPine v3.0 2101
AutoFact: Cyclin-T1-4 n=2 Tax=Oryza sativa Japonica Group RepID=CCT14_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycT1 4.6e-35
Complete
sp_v3.0_unigene939 SustainPine v3.0 839
AutoFact: Mpp10 multi-domain protein 3.0e-06
coding
sp_v3.0_unigene945 SustainPine v3.0 1007
AutoFact: ATQSOX1; thioredoxin family protein 6.0e-17
FL-Next: sp=Sulfhydryl oxidase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene951 SustainPine v3.0 2178
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.978e-16
Complete
sp_v3.0_unigene955 SustainPine v3.0 2577
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene979 SustainPine v3.0 1857
AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative RING zinc finger protein 4.173e-06
Complete
sp_v3.0_unigene983 SustainPine v3.0 3457
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 1.535e-15
Putative Complete
sp_v3.0_unigene1000 SustainPine v3.0 4457
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4L3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 101 kDa heat shock protein 1.886e-08
Putative Complete
sp_v3.0_unigene1030 SustainPine v3.0 3717
AutoFact: Enhanced disease resistance 1 n=1 Tax=Delphinium 'MagicFountains dark blue' RepID=Q76BL0_9MAGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 1.629e-25
Complete
sp_v3.0_unigene1032 SustainPine v3.0 2314
AutoFact: 6-phosphofructokinase 2 [Arabidopsis thaliana] sp|Q9FIK0.1|K6PF2_ARATH RecName: Full=6-phosphofructokinase 2; AltName: Full=Phosphofructokinase 2; AltName: Full=Phosphohexokinase 2 dbj|BAB11328.1| pyrophosphate-fructose-6-phosphate 1-phosphotransferase-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphofructokinase, putative 2.402e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain