Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1941 SustainPine v3.0 1484
AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5A9K5_PICSI 0.0
FL-Next: sp=Methionine aminopeptidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine aminopeptidase 0.0
Complete
sp_v3.0_unigene2006 SustainPine v3.0 2580
AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aspartyl-tRNA synthetase, putative 2.487e-09
Complete
sp_v3.0_unigene2007 SustainPine v3.0 3104
AutoFact: kinesin 3 [Arabidopsis thaliana] sp|P46875.1|ATK3_ARATH RecName: Full=Kinesin-3; AltName: Full=Kinesin-like protein C dbj|BAA04674.1| heavy chain polypeptide of kinesin-like protein [Arabidopsis thaliana] gb|AAO24588.1| At5g54670 [Arabidopsis thaliana] db 0.0
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Kinesin heavy chain, putative 2.504e-15
Complete
sp_v3.0_unigene2017 SustainPine v3.0 1030
AutoFact: putative tRNA synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamyl-tRNA synthetase 1.31e-10
C-terminus
sp_v3.0_unigene2062 SustainPine v3.0 1368
AutoFact: RNase PD2 (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLS1_PRUDU 0.0
FL-Next: sp=Ribonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: S-like RNase 5.416e-14
Complete
sp_v3.0_unigene2132 SustainPine v3.0 872
AutoFact: Alcohol dehydrogenase 7 n=1 Tax=Vitis vinifera RepID=Q9M6B4_VITVI 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alcohol dehydrogenase 2.248e-30
C-terminus
sp_v3.0_unigene2136 SustainPine v3.0 1621
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.756e-14
C-terminus
sp_v3.0_unigene2140 SustainPine v3.0 2099
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Complete
sp_v3.0_unigene2150 SustainPine v3.0 493
AutoFact: Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana] sp|Q9LG26.2|PARN_ARATH RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Polyadenylate-specific ribonuclease; Short=AtPARN; AltName: Full=Protein ABA hypersensitive germination 2 dbj| 1.0e-31
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene2183 SustainPine v3.0 903
AutoFact: heat shock protein HSP81-1 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene2193 SustainPine v3.0 2495
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAK43867.1|AF370490_1 putative T-complex protein 1, theta subunit; TCP-1-Theta [Arabidopsis thaliana] gb|AAQ56831.1| At3g03960 [Arabidopsis thaliana] gb|AEE74018.1| TCP-1/cpn60 chaperonin fam 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2220 SustainPine v3.0 2056
AutoFact: Aminomethyltransferase n=1 Tax=Picea sitchensis RepID=D5A852_PICSI 0.0
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_297, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene2231 SustainPine v3.0 1613
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 6.743e-09
Complete
sp_v3.0_unigene2242 SustainPine v3.0 1767
AutoFact: aldehyde dehydrogenase [Vitis pseudoreticulata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Betaine aldehyde dehydrogenase 0.0
C-terminus
sp_v3.0_unigene2336 SustainPine v3.0 587
AutoFact: FAP multi-domain protein 2.0e-15
Sma3: Anther-specific proline rich protein 1.837e-06
coding
sp_v3.0_unigene2341 SustainPine v3.0 459
AutoFact: AAA ATPase, central region; L-lactate dehydrogenase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 2.38e-13
Internal
sp_v3.0_unigene2343 SustainPine v3.0 2205
AutoFact: Hexokinase 6 n=1 Tax=Nicotiana tabacum RepID=Q6Q8A0_TOBAC 0.0
FL-Next: sp=Hexokinase-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene2346 SustainPine v3.0 1683
AutoFact: Proline iminopeptidase n=2 Tax=Malpighiales RepID=B9GIQ0_POPTR 0.0
FL-Next: sp=Proline iminopeptidase; subsp. trichocarpa). 0.0
Sma3: Proline iminopeptidase 1.267e-24
Complete
sp_v3.0_unigene2354 SustainPine v3.0 4198
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene2360 SustainPine v3.0 1542
AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5AA02_PICSI 0.0
FL-Next: sp=Methionine aminopeptidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine aminopeptidase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain