Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene777 SustainPine v3.0 1630
AutoFact: P4H isoform 1 [Arabidopsis thaliana] gb|AAC64297.1| hypothetical protein [Arabidopsis thaliana] gb|AAM15158.1| hypothetical protein [Arabidopsis thaliana] dbj|BAC42340.1| unknown protein [Arabidopsis thaliana] gb|AAP04083.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Prolyl 4-hydroxylase alpha subunit, putative 6.543e-20
Complete
sp_v3.0_unigene845 SustainPine v3.0 2956
AutoFact: armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] gb|AEE75940.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8 1.091e-08
Putative Complete
sp_v3.0_unigene850 SustainPine v3.0 989
AutoFact: OB-fold nucleic acid binding domain-containing protein n=2 Tax=Arabidopsis RepID=Q93VB0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable methionyl-tRNA synthetase 2.074e-08
C-terminus
sp_v3.0_unigene855 SustainPine v3.0 2255
AutoFact: Malic enzyme n=1 Tax=Ricinus communis RepID=B9RKI6_RICCO 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 0.0
Complete
sp_v3.0_unigene874 SustainPine v3.0 1159
AutoFact: Structural molecule, putative n=1 Tax=Ricinus communis RepID=B9SRI7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene923 SustainPine v3.0 1604
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene969 SustainPine v3.0 2206
AutoFact: Heat shock transcription factor (HSF) [Glycine max] 1.4013e-45
FL-Next: sp=Heat stress transcription factor B-4d; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Heat shock factor protein, putative 4.809e-12
Complete
sp_v3.0_unigene983 SustainPine v3.0 3457
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 1.535e-15
Putative Complete
sp_v3.0_unigene993 SustainPine v3.0 1055
AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein SMT3 3.762e-16
Complete
sp_v3.0_unigene995 SustainPine v3.0 1400
AutoFact: AKAP7_NLS domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6 9.234e-09
C-terminus
sp_v3.0_unigene1005 SustainPine v3.0 3423
AutoFact: Histidyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SHN6_RICCO 0.0
FL-Next: sp=Histidine--tRNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histidyl-tRNA synthetase 4.689e-12
Putative Complete
sp_v3.0_unigene1010 SustainPine v3.0 1742
AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1031 SustainPine v3.0 2956
AutoFact: CRAL_TRIO multi-domain protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Patellin-4, putative 4.509e-12
Complete
sp_v3.0_unigene1157 SustainPine v3.0 1254
AutoFact: translation initiation factor eIF-5 [Arabidopsis thaliana] sp|Q9S825.1|IF5Z_ARATH RecName: Full=Probable eukaryotic translation initiation factor 5-2; Short=eIF-5 2 gb|AAF17676.1|AC009243_3 F28K19.5 [Arabidopsis thaliana] gb|AAG51628.1|AC012193_10 putativ 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1176 SustainPine v3.0 1595
AutoFact: patatin-like protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Patatin-like protein 3.861e-35
Complete
sp_v3.0_unigene1185 SustainPine v3.0 1965
AutoFact: COP9 signalosome complex subunit 3 [Arabidopsis thaliana] sp|Q8W575.2|CSN3_ARATH RecName: Full=COP9 signalosome complex subunit 3; Short=Signalosome subunit 3; AltName: Full=Protein FUSCA 11 gb|AAL58102.1|AF395059_1 CSN complex subunit 3 [Arabidopsis thal 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: COP9 signalosome complex subunit 3 3.263e-13
Complete
sp_v3.0_unigene1201 SustainPine v3.0 1239
AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 2.548e-17
C-terminus
sp_v3.0_unigene1219 SustainPine v3.0 3115
AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9R931_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Calcium-dependent protein kinase 0.0
Complete
sp_v3.0_unigene1250 SustainPine v3.0 849
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative chaperonin 1.608e-07
Putative Complete
sp_v3.0_unigene1277 SustainPine v3.0 1690
AutoFact: putative tryptophanyl-tRNA synthetase [Oryza sativa Japonica Group] gb|EAY75781.1| hypothetical protein OsI_03697 [Oryza sativa Indica Group] gb|EAZ13498.1| hypothetical protein OsJ_03415 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain