Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene30376 SustainPine v3.0 1143
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAS76220.1| At4g15770 [Arabidopsis thaliana] gb|AEE83650.1| RNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_2, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene56443 SustainPine v3.0 409
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene152328 SustainPine v3.0 433
AutoFact: PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB992E 0.0
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153785 SustainPine v3.0 436
AutoFact: 60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Rana catesbeiana RepID=C1C4D1_RANCA 1.99993e-41
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154864 SustainPine v3.0 549
AutoFact: 60S ribosome subunit biogenesis protein NIP7 homolog [Xenopus (Silurana) tropicalis] sp|A4QND5.1|NIP7_XENTR RecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog gb|AAI35469.1| LOC100125143 protein [Xenopus (Silurana) tropicalis] 0.0
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain