Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3681 SustainPine v3.0 4414
• AutoFact: isoleucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE82867.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Isoleucyl tRNA synthetase, putative 6.095e-08
Putative Complete
sp_v3.0_unigene5367 SustainPine v3.0 3463
• AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 1.747e-15
C-terminus
sp_v3.0_unigene7618 SustainPine v3.0 1149
• AutoFact: isoleucine-tRNA ligase-like protein [Arabidopsis thaliana] emb|CAB78155.1| isoleucine-tRNA ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Isoleucyl tRNA synthetase, putative 5.646e-08
Putative N-terminus
sp_v3.0_unigene9721 SustainPine v3.0 776
• AutoFact: isoleucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thalia 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Isoleucyl-tRNA synthetase 4.294e-08
Internal
sp_v3.0_unigene10485 SustainPine v3.0 524
• AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valine--tRNA ligase-like protein 1.408e-08
Internal
sp_v3.0_unigene24996 SustainPine v3.0 1197
• AutoFact: Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group] gb|AAX95729.1| valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 1.447e-11
Putative C-terminus
sp_v3.0_unigene35805 SustainPine v3.0 571
• AutoFact: putative isoleucine-tRNA ligase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene37298 SustainPine v3.0 495
• AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase, putative 9.958e-15
Internal
sp_v3.0_unigene51820 SustainPine v3.0 242
• AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 3.0e-16
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 4.191e-08
Internal
sp_v3.0_unigene65177 SustainPine v3.0 123
• AutoFact: tRNA synthetase class I (ISS) [Ostreococcus tauri] emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri] 1.0e-11
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valine--tRNA ligase-like protein 5.596e-09
Internal
sp_v3.0_unigene66729 SustainPine v3.0 364
• AutoFact: Valyl-tRNA synthetase n=1 Tax=Arabidopsis thaliana RepID=F4KE63_ARATH 2.0e-40
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75049 SustainPine v3.0 411
• AutoFact: Valyl-tRNA synthetase n=2 Tax=Acidovorax RepID=A1W9W2_ACISJ 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 4.956e-08
Internal
sp_v3.0_unigene77322 SustainPine v3.0 175
• AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 4.0e-10
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase, putative 7.092e-12
Internal
sp_v3.0_unigene78289 SustainPine v3.0 247
• AutoFact: valine-tRNA ligase [Coprinopsis cinerea okayama7#130] gb|EAU84605.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130] 7.0e-28
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102804 SustainPine v3.0 819
• AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene107056 SustainPine v3.0 658
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_47.assembly12x (Fragment) n=4 Tax=Vitis vinifera RepID=D7TF60_VITVI 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase, putative 1.193e-14
Internal
sp_v3.0_unigene107231 SustainPine v3.0 141
• AutoFact: Putative valyl-tRNA synthetase n=1 Tax=Oryza sativa Japonica Group RepID=Q7EZJ3_ORYSJ 6.0e-17
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 3.007e-15
Internal
sp_v3.0_unigene154209 SustainPine v3.0 523
• AutoFact: PREDICTED: similar to Vars protein, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45D6E 2.0e-17
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene156370 SustainPine v3.0 398
• AutoFact: putative valyl tRNA synthetase (ISS) [Ostreococcus tauri] emb|CAL52939.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri] 9.0e-16
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene157196 SustainPine v3.0 400
• AutoFact: Isoleucyl-tRNA synthetase n=1 Tax=Dictyostelium fasciculatum RepID=F4Q549_9MYCE 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain