Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58813 SustainPine v3.0 180
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R6H5_ORYSJ 1.0e-07
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59064 SustainPine v3.0 436
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 4.99983e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene59182 SustainPine v3.0 147
AutoFact: retrotransposon protein [Beta vulgaris] 2.0e-07
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene59622 SustainPine v3.0 153
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 2.0e-13
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59675 SustainPine v3.0 182
AutoFact: Putative gag-pol polyprotein n=1 Tax=Petunia x hybrida RepID=Q6VPE8_PETHY 4.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59890 SustainPine v3.0 296
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Asparagus officinalis RepID=Q2A9Z5_ASPOF 8.0e-25
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 7.238e-11
Putative N-terminus
sp_v3.0_unigene59998 SustainPine v3.0 425
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 6.99949e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene60109 SustainPine v3.0 284
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXU8_ORYSJ 1.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: H0823A09.5 protein 7.797e-06
Putative N-terminus
sp_v3.0_unigene60145 SustainPine v3.0 204
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 6.0e-12
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene60434 SustainPine v3.0 383
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.381e-31
Putative Complete
sp_v3.0_unigene60444 SustainPine v3.0 353
AutoFact: RVT_1 domain containing protein 2.0e-12
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.6e-08
Putative Complete
sp_v3.0_unigene60457 SustainPine v3.0 200
AutoFact: RNaseH/reverse transcriptase n=1 Tax=Sweetpotato badnavirus A RepID=C4NFM5_9VIRU 6.0e-11
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene60981 SustainPine v3.0 248
AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 1.0e-28
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene61035 SustainPine v3.0 228
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 3.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 8.754e-11
Putative C-terminus
sp_v3.0_unigene61174 SustainPine v3.0 189
AutoFact: Pol polyprotein n=1 Tax=Nosema bombycis RepID=Q15F61_NOSBO 5.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene61320 SustainPine v3.0 295
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene61505 SustainPine v3.0 269
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] 2.0e-27
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.843e-39
Putative C-terminus
sp_v3.0_unigene61661 SustainPine v3.0 94
AutoFact: Unassigned protein
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene62046 SustainPine v3.0 246
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FW76_ORYSJ 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.938e-09
Putative N-terminus
sp_v3.0_unigene62122 SustainPine v3.0 137
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 1.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.069e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain