Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene57648 SustainPine v3.0 250
AutoFact: Polyprotein n=1 Tax=Phanerochaete chrysosporium RP-78 RepID=Q45W66_PHACH 3.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene57707 SustainPine v3.0 356
AutoFact: Copia-like retroelement pol polyprotein-like n=3 Tax=Arabidopsis thaliana RepID=O49548_ARATH 3.0e-16
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene57769 SustainPine v3.0 357
AutoFact: RVT_2 domain containing protein 8.0e-37
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.397e-15
Internal
sp_v3.0_unigene57972 SustainPine v3.0 525
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.177e-29
Internal
sp_v3.0_unigene58052 SustainPine v3.0 353
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.0e-11
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene58066 SustainPine v3.0 457
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 1.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene58117 SustainPine v3.0 283
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-16
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene58164 SustainPine v3.0 302
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene58166 SustainPine v3.0 159
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-09
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene58174 SustainPine v3.0 365
AutoFact: Os08g0389500 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5Y3_ORYSJ 2.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene58194 SustainPine v3.0 454
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene58337 SustainPine v3.0 350
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 4.0e-37
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.535e-21
Putative C-terminus
sp_v3.0_unigene58387 SustainPine v3.0 447
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene58523 SustainPine v3.0 267
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene58540 SustainPine v3.0 225
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 7.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase-like protein 2.538e-22
Internal
sp_v3.0_unigene58552 SustainPine v3.0 479
AutoFact: Putative polyprotein n=1 Tax=Solanum demissum RepID=Q6L4J8_SOLDE 2.0e-10
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene58798 SustainPine v3.0 313
AutoFact: CCHC-type integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCC5_POPTR 7.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 4.991e-16
Internal
sp_v3.0_unigene58812 SustainPine v3.0 397
AutoFact: OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa RepID=Q7XTU6_ORYSA 9.0e-21
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene58969 SustainPine v3.0 446
AutoFact: OSJNBa0061G20.13 protein n=3 Tax=Oryza sativa RepID=Q7XME6_ORYSJ 4.0e-23
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene59082 SustainPine v3.0 417
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 4.0e-36
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 7.701e-11
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain