Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75661 SustainPine v3.0 377
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene78428 SustainPine v3.0 233
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI 4.0e-29
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene79159 SustainPine v3.0 402
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-13
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 5.027e-36
Putative Complete
sp_v3.0_unigene105609 SustainPine v3.0 74
• AutoFact: RuBisCO_small domain containing protein 0.0001
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene116260 SustainPine v3.0 67
• AutoFact: RuBisCO_small domain containing protein 3.0e-05
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene124324 SustainPine v3.0 129
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 7.0e-10
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 3.966e-07
Putative C-terminus
sp_v3.0_unigene146366 SustainPine v3.0 283
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPY1_PICSI 9.0e-29
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene146422 SustainPine v3.0 554
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.0e-35
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene146587 SustainPine v3.0 651
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPY1_PICSI 3.0e-09
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 7.49e-32
C-terminus
sp_v3.0_unigene149384 SustainPine v3.0 221
• AutoFact: Unassigned protein
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene166405 SustainPine v3.0 231
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=B8LPE7_PICSI 3.0e-08
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene191833 SustainPine v3.0 625
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene207879 SustainPine v3.0 419
• AutoFact: Ribulose bisphosphate carboxylase small chain n=6 Tax=Pinaceae RepID=A9NZM2_PICSI 2.0e-26
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 7.303e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain