Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene49562 SustainPine v3.0 411
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene53212 SustainPine v3.0 384
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-09
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene55246 SustainPine v3.0 334
AutoFact: PREDICTED: histone cluster 1, H2bl-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC017 9.94922e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene55916 SustainPine v3.0 370
AutoFact: Histone H2A (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q43286_ARATH 7.0e-21
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene57979 SustainPine v3.0 450
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-20
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene58023 SustainPine v3.0 228
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene58477 SustainPine v3.0 238
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 5.188e-37
N-terminus
sp_v3.0_unigene65807 SustainPine v3.0 126
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67293 SustainPine v3.0 289
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 1.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene67553 SustainPine v3.0 247
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 3.0e-18
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 1.96182e-44
C-terminus
sp_v3.0_unigene67828 SustainPine v3.0 262
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.0e-12
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene69106 SustainPine v3.0 225
AutoFact: Histone H2A n=2 Tax=rosids RepID=E3NYV0_9FABA 1.0e-07
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene70732 SustainPine v3.0 380
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 5.0e-09
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 1.093e-16
N-terminus
sp_v3.0_unigene71375 SustainPine v3.0 213
AutoFact: Histone H2A n=1 Tax=Chlorella variabilis RepID=E1Z345_9CHLO 8.0e-08
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 2.71e-06
Internal
sp_v3.0_unigene79662 SustainPine v3.0 167
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94863 SustainPine v3.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene97825 SustainPine v3.0 464
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 1.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene101905 SustainPine v3.0 466
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene117515 SustainPine v3.0 215
AutoFact: Histone H2A n=2 Tax=Selaginella moellendorffii RepID=D8RG98_SELML 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene127737 SustainPine v3.0 1014
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 3.0e-20
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain