Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene225 SustainPine v3.0 2398
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene6005 SustainPine v3.0 2576
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Ricinus communis RepID=B9RJC7_RICCO 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene30227 SustainPine v3.0 1998
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene47524 SustainPine v3.0 207
AutoFact: SHMT domain containing protein 1.0e-07
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59448 SustainPine v3.0 277
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 3.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 2.254e-12
Internal
sp_v3.0_unigene60048 SustainPine v3.0 385
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 4.0e-29
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene68326 SustainPine v3.0 346
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 2.0e-12
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 3.979e-15
Internal
sp_v3.0_unigene70660 SustainPine v3.0 492
AutoFact: Serine hydroxymethyltransferase n=9 Tax=Poaceae RepID=Q7Y1F0_ORYSJ 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene75213 SustainPine v3.0 372
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 2.0e-38
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Misassembled
sp_v3.0_unigene120208 SustainPine v3.0 125
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 4.0e-12
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 1.102e-06
Internal
sp_v3.0_unigene127856 SustainPine v3.0 1763
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene140616 SustainPine v3.0 731
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene148925 SustainPine v3.0 262
AutoFact: Unassigned protein
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene150830 SustainPine v3.0 527
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ31_PHYPA 1.99993e-41
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene151294 SustainPine v3.0 419
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Thalassiosira pseudonana RepID=B8CCS6_THAPS 6.0e-29
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene151578 SustainPine v3.0 445
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=GLYA_CELJU 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene151775 SustainPine v3.0 498
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y594_PHATC 2.99878e-43
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene157330 SustainPine v3.0 479
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Dictyostelium purpureum RepID=F0ZDZ0_DICPU 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene159415 SustainPine v3.0 483
AutoFact: Putative serine hydroxymethyltransferase, mitochondrial n=2 Tax=Sordariaceae RepID=GLYM_NEUCR 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain