Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2548 SustainPine v3.0 1707
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene2570 SustainPine v3.0 3132
AutoFact: cytoplasmic cysteine-tRNA ligase Crs1 (predicted) [Schizosaccharomyces pombe 972h-] sp|Q09860.1|SYC_SCHPO RecName: Full=Probable cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS emb|CAA91428.1| putative cysteinyl-trna synthetase 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Cysteinyl-tRNA synthetase, putative 1.508e-08
Complete
sp_v3.0_unigene2572 SustainPine v3.0 2488
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene2647 SustainPine v3.0 1435
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene2655 SustainPine v3.0 3584
AutoFact: lysosomal alpha-mannosidase [Cavia porcellus] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Lysosomal alpha-mannosidase, putative 1.648e-15
Complete
sp_v3.0_unigene2932 SustainPine v3.0 833
AutoFact: DWNN domain-containing protein [Arabidopsis thaliana] gb|AEE83884.1| DWNN domain-containing protein [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene3014 SustainPine v3.0 3604
AutoFact: GA23868 gene product from transcript GA23868-RA 3.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene3051 SustainPine v3.0 3021
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAC41980.1| unknown protein [Arabidopsis thaliana] gb|AAO64896.1| At4g34280 [Arabidopsis thaliana] gb|AEE86354.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene3064 SustainPine v3.0 1421
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFD4_PHYPA 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene3072 SustainPine v3.0 3585
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene3091 SustainPine v3.0 2684
AutoFact: zf-TRAF domain containing protein 3.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene3159 SustainPine v3.0 1238
AutoFact: DUF1264 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene3337 SustainPine v3.0 1404
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene3350 SustainPine v3.0 4696
AutoFact: PAT1 multi-domain protein 6.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative uncharacterized protein CC0374 7.98e-11
Putative C-terminus
sp_v3.0_unigene3401 SustainPine v3.0 1350
AutoFact: metal ion binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene3594 SustainPine v3.0 424
AutoFact: pfam10266, Strumpellin, Hereditary spastic paraplegia protein strumpellin 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: [S] KOG3666 Uncharacterized conserved protein 5.848e-06
Internal
sp_v3.0_unigene3636 SustainPine v3.0 3302
AutoFact: Unassigned protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene3688 SustainPine v3.0 1919
AutoFact: PREDICTED: RNA-binding protein 41-like [Monodelphis domestica] 2.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative uncharacterized protein At1g09230 3.411e-06
Putative Complete
sp_v3.0_unigene3716 SustainPine v3.0 2590
AutoFact: Aminoimidazole ribonucleotide carboxylase n=2 Tax=Physcomitrella patens RepID=A5A0Q9_9BRYO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 1.351e-08
Putative Complete
sp_v3.0_unigene3799 SustainPine v3.0 2901
AutoFact: ankyrin repeat domain-containing protein 27 [Gallus gallus] 2.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain