Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1637 SustainPine v3.0 3159
AutoFact: 2-phosphoglycerate kinase-related protein [Arabidopsis thaliana] dbj|BAB10097.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22756.1| unknown protein [Arabidopsis thaliana] gb|AAO42372.1| unknown protein [Arabidopsis thaliana] gb|AED97374.1| 2-ph 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1765 SustainPine v3.0 1649
AutoFact: DUF1262 multi-domain protein 1.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1786 SustainPine v3.0 1617
AutoFact: DUF829 domain containing protein 5.0e-24
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1790 SustainPine v3.0 2640
AutoFact: ubiquitin interaction motif-containing protein [Arabidopsis thaliana] gb|AAL47453.1| At1g43690/F2J6_4 [Arabidopsis thaliana] gb|AAO11534.1| At1g43690/F2J6_4 [Arabidopsis thaliana] gb|AEE31987.1| ubiquitin interaction motif-containing protein [Arabidopsis 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1801 SustainPine v3.0 2404
AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1909 SustainPine v3.0 1234
AutoFact: Sybindin multi-domain protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Synbindin-like 1.501e-09
Complete
sp_v3.0_unigene1927 SustainPine v3.0 1075
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 1.4013e-45
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1988 SustainPine v3.0 2451
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene2026 SustainPine v3.0 1926
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene2297 SustainPine v3.0 2933
AutoFact: structural constituent of nuclear pore [Arabidopsis thaliana] gb|AAM91808.1| unknown protein [Arabidopsis thaliana] gb|AEC10495.1| structural constituent of nuclear pore [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene2337 SustainPine v3.0 1260
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene2377 SustainPine v3.0 1315
AutoFact: DUF2053 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2457 SustainPine v3.0 2365
AutoFact: SRP40_C multi-domain protein 1.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene2523 SustainPine v3.0 1793
AutoFact: glycolipid transfer protein 1 [Arabidopsis thaliana] ref|NP_973588.1| glycolipid transfer protein 1 [Arabidopsis thaliana] gb|AAB80664.1| expressed protein [Arabidopsis thaliana] gb|AAM63096.1| unknown [Arabidopsis thaliana] gb|AAO42225.1| unknown protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Glycolipid transfer protein, putative 1.736e-09
Complete
sp_v3.0_unigene2535 SustainPine v3.0 2109
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|ABE65859.1| hypothetical protein At2g24320 [Arabidopsis thaliana] gb|AEC07562.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Protein bem46, putative 5.077e-23
Complete
sp_v3.0_unigene2610 SustainPine v3.0 1508
AutoFact: Tymo_45kd_70kd multi-domain protein 4.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene2690 SustainPine v3.0 2090
AutoFact: SMC_N multi-domain protein 6.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene2723 SustainPine v3.0 2458
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene2845 SustainPine v3.0 1291
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Os02g0128100 protein 2.437e-06
Putative Complete
sp_v3.0_unigene2924 SustainPine v3.0 1018
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain