Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene14578 SustainPine v3.0 435
AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 9.99967e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene14707 SustainPine v3.0 2320
AutoFact: DUF1639 domain containing protein 4.0e-15
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene14717 SustainPine v3.0 874
AutoFact: DUF1191 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene14744 SustainPine v3.0 825
AutoFact: beta 1,2 N-acetylglucosaminyltransferase [Populus tremula x Populus alba] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene14901 SustainPine v3.0 304
AutoFact: transcription factor jumonji (jmjC) domain-containing protein-like [Oryza sativa Japonica Group] 6.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene14904 SustainPine v3.0 493
AutoFact: FAD/NAD(P)-binding oxidoreductase-like protein [Arabidopsis thaliana] gb|AEE85801.1| FAD/NAD(P)-binding oxidoreductase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene15102 SustainPine v3.0 1473
AutoFact: WD-40 repeat protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative WD-40 repeat protein 4.182e-07
C-terminus
sp_v3.0_unigene15170 SustainPine v3.0 579
AutoFact: UvrD/REP helicase family protein [Trichomonas vaginalis G3] gb|EAY01482.1| UvrD/REP helicase family protein [Trichomonas vaginalis G3] 9.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene15201 SustainPine v3.0 355
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene15478 SustainPine v3.0 1982
AutoFact: Ndc1_Nup domain containing protein 2.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene15583 SustainPine v3.0 725
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene15595 SustainPine v3.0 530
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Ran GTPase binding protein, putative 1.908e-22
Putative N-terminus
sp_v3.0_unigene15817 SustainPine v3.0 967
AutoFact: protein hapless 8 [Arabidopsis thaliana] ref|NP_974941.1| protein hapless 8 [Arabidopsis thaliana] dbj|BAB09116.1| unnamed protein product [Arabidopsis thaliana] gb|AAL67068.1| unknown protein [Arabidopsis thaliana] gb|AAM20388.1| unknown protein [Arabido 2.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene15839 SustainPine v3.0 1160
AutoFact: putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAF14851.1|AC011664_33 putative helicase [Arabidopsis thaliana] gb|AEE73755.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.755e-09
Putative N-terminus
sp_v3.0_unigene16200 SustainPine v3.0 815
AutoFact: GPI-anchor transamidase [Cryptococcus neoformans var. neoformans JEC21] gb|AAW45462.1| GPI-anchor transamidase, putative [Cryptococcus neoformans var. neoformans JEC21] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene16384 SustainPine v3.0 609
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 1.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene16494 SustainPine v3.0 705
AutoFact: DUF630 domain containing protein 8.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene16595 SustainPine v3.0 923
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene16615 SustainPine v3.0 623
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene16724 SustainPine v3.0 863
AutoFact: thioredoxin fold-containing protein [Arabidopsis thaliana] gb|AAK55694.1|AF378891_1 AT4g08280/T12G13_120 [Arabidopsis thaliana] gb|AAK91492.1| AT4g08280/T12G13_120 [Arabidopsis thaliana] gb|AEE82620.1| thioredoxin fold-containing protein [Arabidopsis thal 1.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain