Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene244 SustainPine v3.0 2841
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene696 SustainPine v3.0 1336
AutoFact: coilin [Arabidopsis thaliana] gb|AAM13027.1| unknown protein [Arabidopsis thaliana] gb|AAM91333.1| unknown protein [Arabidopsis thaliana] gb|AEE28961.1| coilin [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene736 SustainPine v3.0 975
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene796 SustainPine v3.0 2016
AutoFact: BCL-2-associated athanogene 6 [Arabidopsis thaliana] gb|AAC62882.1| hypothetical protein [Arabidopsis thaliana] gb|AEC10664.1| BCL-2-associated athanogene 6 [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene901 SustainPine v3.0 1966
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene919 SustainPine v3.0 4653
AutoFact: component of IIS longevity pathway SMK-1 domain-containing protein [Arabidopsis thaliana] gb|AAM19788.1| At3g06670/T8E24.10 [Arabidopsis thaliana] gb|AAO23576.1| At3g06670/T8E24.10 [Arabidopsis thaliana] gb|AEE74437.1| component of IIS longevity pathway S 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene959 SustainPine v3.0 2227
AutoFact: Rxt3 domain containing protein 4.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene1046 SustainPine v3.0 1423
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB88257.1| putative protein [Arabidopsis thaliana] gb|ACF22896.1| At5g12930 [Arabidopsis thaliana] gb|AED91832.1| uncharacterized protein [Arabidopsis thaliana] 5.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene1145 SustainPine v3.0 1460
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1160 SustainPine v3.0 1204
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMG0_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene1222 SustainPine v3.0 1780
AutoFact: Myosin_tail_1 multi-domain protein 6.0e-12
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene1272 SustainPine v3.0 2908
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein OJ1124_D06.12-1 5.848e-06
Complete
sp_v3.0_unigene1277 SustainPine v3.0 1690
AutoFact: putative tryptophanyl-tRNA synthetase [Oryza sativa Japonica Group] gb|EAY75781.1| hypothetical protein OsI_03697 [Oryza sativa Indica Group] gb|EAZ13498.1| hypothetical protein OsJ_03415 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1278 SustainPine v3.0 1288
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene1310 SustainPine v3.0 2226
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1337 SustainPine v3.0 1281
AutoFact: embryo defective 1381 protein [Arabidopsis thaliana] gb|AEC08529.1| embryo defective 1381 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene1345 SustainPine v3.0 2696
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FHS6.1|FK119_ARATH RecName: Full=F-box/kelch-repeat protein At5g43190 dbj|BAB10582.1| unnamed protein product [Arabidopsis thaliana] gb|AAO23649.1| At5g43190 [Arabidopsis thaliana] dbj|BAE99583.1| hyp 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene1428 SustainPine v3.0 1466
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene1447 SustainPine v3.0 1736
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL24204.1| AT5g18630/T1A4_10 [Arabidopsis thaliana] gb|AAN31885.1| putative triacylglycerol lipase [Arabidopsis thaliana] dbj|BAE99159.1| triacylglycerol lipase-like protein [Arabid 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Lipase 8.819e-18
Complete
sp_v3.0_unigene1506 SustainPine v3.0 3078
AutoFact: Exocyst complex component 7 n=3 Tax=Arabidopsis RepID=Q9LJH9_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Protein binding protein, putative 1.857e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain