Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1843 SustainPine v3.0 933
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 0.0
• FL-Next: tr=Antimicrobial peptide 1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Antimicrobial peptide 1 0.0
Complete
sp_v3.0_unigene17041 SustainPine v3.0 791
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 0.0
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 3 0.0
Complete
sp_v3.0_unigene21233 SustainPine v3.0 655
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 0.0
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 3 0.0
Complete
sp_v3.0_unigene28156 SustainPine v3.0 887
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 6.0e-22
• FL-Next: tr=Antimicrobial peptide 2; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
Complete
sp_v3.0_unigene29673 SustainPine v3.0 1003
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 0.0
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 3 0.0
Complete
sp_v3.0_unigene35762 SustainPine v3.0 640
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 0.0
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 3 0.0
Complete
sp_v3.0_unigene80893 SustainPine v3.0 270
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 2.0e-34
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
N-terminus
sp_v3.0_unigene143732 SustainPine v3.0 646
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 2.0e-36
• FL-Next: tr=Antimicrobial peptide 1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
Misassembled
sp_v3.0_unigene145723 SustainPine v3.0 681
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 3.0e-24
• FL-Next: tr=Antimicrobial peptide 1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
C-terminus
sp_v3.0_unigene145737 SustainPine v3.0 352
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 1.0e-38
• FL-Next: tr=Antimicrobial peptide 2; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 1 6.184e-09
Putative Complete
sp_v3.0_unigene145842 SustainPine v3.0 557
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 6.00036e-42
• FL-Next: tr=Antimicrobial peptide 3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
Putative Complete
sp_v3.0_unigene209070 SustainPine v3.0 407
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 1.0e-23
• FL-Next: tr=Antimicrobial peptide 1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Antimicrobial peptide 1 7.461e-09
C-terminus
sp_v3.0_unigene210496 SustainPine v3.0 177
• AutoFact: Antimicrobial peptide 1 n=2 Tax=Pinus RepID=Q71QE0_PINSY 4.0e-26
• FL-Next: tr=Antimicrobial peptide 1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Antimicrobial peptide 1 9.11e-13
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain