Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: rna recognition motif-containing protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene36917 SustainPine v2.0 464
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8T5_RICCO 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 8.50157e-39
Putative Complete
sp_v2.0_unigene37729 SustainPine v2.0 553
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAO41908.1| unknown protein [Arabidopsis thaliana] gb|AAO50688.1| unknown protein [Arabidopsis thaliana] gb|AEE35032.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna recognition motif-containing protein 2.04873e-21
Internal
sp_v2.0_unigene40317 SustainPine v2.0 586
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
sp_v2.0_unigene59664 SustainPine v2.0 630
AutoFact: pfam00076, RRM_1, RNA recognition motif 3.0e-05
FL-Next: tr=Os02g0138200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna recognition motif-containing protein 8.75526e-34
N-terminus
sp_v2.0_unigene59860 SustainPine v2.0 444
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE35845.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 9.2077e-19
Putative N-terminus
sp_v2.0_unigene60134 SustainPine v2.0 617
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna recognition motif-containing protein 9.38617e-18
C-terminus
sp_v2.0_unigene60604 SustainPine v2.0 1978
AutoFact: RNA-binding protein AKIP1-like n=1 Tax=Solanum tuberosum RepID=Q2V9B8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene60822 SustainPine v2.0 1563
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative Complete
sp_v2.0_unigene61047 SustainPine v2.0 1486
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene61475 SustainPine v2.0 1031
AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
sp_v2.0_unigene62502 SustainPine v2.0 1361
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene64337 SustainPine v2.0 469
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMS1_RICCO 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna recognition motif-containing protein 8.51409e-19
Internal
sp_v2.0_unigene65739 SustainPine v2.0 548
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AED97256.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 1.13985e-27
Putative N-terminus
sp_v2.0_unigene68906 SustainPine v2.0 198
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 4.12995e-21
Internal
sp_v2.0_unigene77033 SustainPine v2.0 958
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
sp_v2.0_unigene79030 SustainPine v2.0 385
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|ABL66782.1| At1g76940 [Arabidopsis thaliana] gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 3.50601e-21
C-terminus
sp_v2.0_unigene80375 SustainPine v2.0 481
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana] gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis t 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain