Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene26919 SustainPine v2.0 520
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Flags: Precursor gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene27033 SustainPine v2.0 636
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3S4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene27184 SustainPine v2.0 2189
• AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
• FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene27463 SustainPine v2.0 2095
• AutoFact: DNA-binding protein [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene27858 SustainPine v2.0 935
• AutoFact: glutamine-rich protein 23 [Arabidopsis thaliana] sp|Q9SY69.1|PPR29_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN 23 gb|AAD32877.1|AC005489_15 F14N23.15 [Arabidopsis thaliana] gb|AEE 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene27966 SustainPine v2.0 327
• AutoFact: pfam01535, PPR, PPR repeat 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.33879e-28
Internal
sp_v2.0_unigene28889 SustainPine v2.0 927
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5XET4.1|PP142_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01860; AltName: Full=Protein EMBRYO DEFECTIVE 975 gb|AAU95418.1| At2g01860 [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene29049 SustainPine v2.0 554
• AutoFact: Pentatricopeptide repeat n=1 Tax=Medicago truncatula RepID=Q2HSE6_MEDTR 2.0e-20
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g01570; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.0443e-22
C-terminus
sp_v2.0_unigene29058 SustainPine v2.0 509
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010 dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75762.1| pentatricopeptide 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.89594e-21
Putative C-terminus
sp_v2.0_unigene29509 SustainPine v2.0 415
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8M0_RICCO 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.88681e-22
Internal
sp_v2.0_unigene29719 SustainPine v2.0 416
• AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene29932 SustainPine v2.0 465
• AutoFact: Os10g0358700 protein n=3 Tax=Oryza sativa RepID=Q7XFE8_ORYSJ 8.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g01390; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.35506e-21
Internal
sp_v2.0_unigene29968 SustainPine v2.0 751
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900 gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene30944 SustainPine v2.0 481
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 40; Flags: Precursor emb|CAB 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.20625e-22
Putative C-terminus
sp_v2.0_unigene30971 SustainPine v2.0 623
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O49343.1|PP177_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g30780 gb|AAC02749.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF00380.1| hypothetical protein 3.0e-13
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g30780; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.32873e-28
Internal
sp_v2.0_unigene31238 SustainPine v2.0 828
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene32144 SustainPine v2.0 467
• AutoFact: pentatricopeptide repeat protein [Zea mays] gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene32288 SustainPine v2.0 430
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
sp_v2.0_unigene32484 SustainPine v2.0 488
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene32506 SustainPine v2.0 450
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor gb|AAF78482.1|AC012187_2 Contains similarity to an unknown prot 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.85478e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain