Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene34413 SustainPine v2.0 257
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 1.0e-08
• FL-Next: tr=Putative gag-pol polyprotein; Oryza sativa (Rice). 0.0
• Blast2go: copia partial 2.54419e-10
C-terminus
sp_v2.0_unigene44520 SustainPine v2.0 312
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 5.0e-15
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: retrotransposon unclassified 1.80151e-17
Putative C-terminus
sp_v2.0_unigene50130 SustainPine v2.0 356
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 1.70183e-17
Internal
sp_v2.0_unigene53690 SustainPine v2.0 445
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 3.38295e-21
Internal
sp_v2.0_unigene59408 SustainPine v2.0 880
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene60040 SustainPine v2.0 866
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain