Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Pseudouridine synthase II

Term: IPR002501  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6350 SustainPine v2.0 2051
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
sp_v2.0_unigene14913 SustainPine v2.0 736
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pseudouridylate synthase transporter 0.0
Internal
sp_v2.0_unigene26551 SustainPine v2.0 1760
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene33549 SustainPine v2.0 632
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] gb|AAD24386.1| hypothetical protein [Arabidopsis thaliana] dbj|BAH30394.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06967.1| Tesmin/TSO1-like CXC domain-containing protein [Ara 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tesmin tso1-like cxc domain-containing protein 2.52234e-44
Internal
sp_v2.0_unigene36700 SustainPine v2.0 575
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tesmin tso1-like cxc domain-containing protein 0.0
N-terminus
sp_v2.0_unigene36791 SustainPine v2.0 424
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tesmin tso1-like cxc domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene68319 SustainPine v2.0 313
AutoFact: putative tRNA synthase [Oryza sativa] 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: trna pseudouridine synthase b 7.68762e-28
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain