Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Mechanosensitive ion channel MscS

Term: IPR006685  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1419 SustainPine v2.0 1568
AutoFact: pfam00924, MS_channel, Mechanosensitive ion channel 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gene product 0.0
N-terminus
sp_v2.0_unigene10135 SustainPine v2.0 1566
AutoFact: Mechanosensitive ion channel domain-containing protein-like n=3 Tax=Oryza sativa RepID=Q6ET90_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mscs family protein at1g78610-like 0.0
Complete
sp_v2.0_unigene27731 SustainPine v2.0 2648
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mscs-like 2 protein 0.0
Putative Complete
sp_v2.0_unigene29194 SustainPine v2.0 494
AutoFact: mechanosensitive channel of small conductance-like 5 [Arabidopsis thaliana] dbj|BAB02647.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75568.1| mechanosensitive channel of small conductance-like 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=Uncharacterized mscS family protein At1g78610; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at3g14810-like protein 0.0
Internal
sp_v2.0_unigene29937 SustainPine v2.0 371
AutoFact: mechanosensitive channel of small conductance-like 5 [Arabidopsis thaliana] dbj|BAB02647.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75568.1| mechanosensitive channel of small conductance-like 5 [Arabidopsis thaliana] 8.0e-13
FL-Next: sp=Uncharacterized mscS family protein At1g78610; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mechanosensitive ion channel domain-containing protein 2.34753e-18
Internal
sp_v2.0_unigene33275 SustainPine v2.0 549
AutoFact: Mechanosensitive ion channel protein [Arabidopsis thaliana] gb|AAL36383.1| unknown protein [Arabidopsis thaliana] gb|AAM20261.1| unknown protein [Arabidopsis thaliana] dbj|BAD44226.1| unknown protein [Arabidopsis thaliana] dbj|BAD44342.1| unknown protein 5.0e-40
FL-Next: tr=Mechanosensitive ion channel domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: mechanosensitive ion channel domain-containing protein 0.0
C-terminus
sp_v2.0_unigene35583 SustainPine v2.0 429
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mscs-like 2 protein 0.0
Internal
sp_v2.0_unigene66578 SustainPine v2.0 374
AutoFact: Gb|AAD30575.1 n=3 Tax=Arabidopsis RepID=Q9LH74_ARATH 3.0e-37
FL-Next: sp=Uncharacterized mscS family protein At1g78610; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at3g14810-like protein 3.71243e-38
Internal
sp_v2.0_unigene76449 SustainPine v2.0 289
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=Putative uncharacterized protein F12B17_160; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mscs-like 2 protein 6.74866e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain