Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SWIB/MDM2 domain

Term: IPR003121  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene593 SustainPine v2.0 1312
AutoFact: SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gb|AAL24145.1| unknown protein [Arabidopsis thaliana] gb|AAM14205.1| unknown protein [Arabidopsis thaliana] gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brg-1 associated 0.0
Complete
sp_v2.0_unigene10985 SustainPine v2.0 920
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 9.0e-20
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swib domain-containing protein 5.49429e-24
Complete
sp_v2.0_unigene13087 SustainPine v2.0 1362
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
sp_v2.0_unigene15165 SustainPine v2.0 1020
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 8.0e-23
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swib domain-containing protein 1.17292e-27
Complete
sp_v2.0_unigene15368 SustainPine v2.0 2373
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v2.0_unigene17688 SustainPine v2.0 934
AutoFact: SWIb domain-containing protein [Solanum chacoense] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18496 SustainPine v2.0 923
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana] gb|AAL15230.1| unknown protein [Arabidopsis thaliana] gb|AAM15040.1| Expressed protein [Arabidopsis thaliana] gb|AAM15113.1| Express 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain-containing protein 2.21842e-29
Complete
sp_v2.0_unigene23528 SustainPine v2.0 748
AutoFact: SWIb domain-containing protein [Solanum chacoense] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene23798 SustainPine v2.0 1135
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene23911 SustainPine v2.0 964
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain-containing protein 0.0
Complete
sp_v2.0_unigene25287 SustainPine v2.0 2035
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 0.0
Complete
sp_v2.0_unigene25526 SustainPine v2.0 668
AutoFact: Brg-1 associated factor, putative n=1 Tax=Ricinus communis RepID=B9S770_RICCO 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 8.96286e-29
C-terminus
sp_v2.0_unigene59426 SustainPine v2.0 558
AutoFact: DNA binding / nucleic acid binding / protein binding / zinc ion binding 3.0e-10
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.76748e-16
Internal
sp_v2.0_unigene60095 SustainPine v2.0 1097
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 1.26117e-44
C-terminus
sp_v2.0_unigene60482 SustainPine v2.0 819
AutoFact: SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana] sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog dbj|BAB08296.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38282.1| unknown protein [Arabidopsis th 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex component snf12 homolog 0.0
C-terminus
sp_v2.0_unigene64247 SustainPine v2.0 505
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 3.72098e-29
N-terminus
sp_v2.0_unigene67952 SustainPine v2.0 258
AutoFact: SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gb|AAL24145.1| unknown protein [Arabidopsis thaliana] gb|AAM14205.1| unknown protein [Arabidopsis thaliana] gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis thal 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.55249e-34
N-terminus
sp_v2.0_unigene78413 SustainPine v2.0 242
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upstream activation factor subunit 5.49957e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain