Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Splicing factor PWI

Term: IPR002483  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1105 SustainPine v2.0 1603
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene1457 SustainPine v2.0 961
AutoFact: pre-mRNA splicing factor domain-containing protein [Arabidopsis thaliana] gb|AAC16071.1| expressed protein [Arabidopsis thaliana] gb|AAK74011.1| At2g44200/F6E13.34 [Arabidopsis thaliana] gb|AAM14905.1| expressed protein [Arabidopsis thaliana] gb|AAM47345. 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna splicing factor domain-containing protein 0.0
C-terminus
sp_v2.0_unigene6053 SustainPine v2.0 506
AutoFact: WS01017.B21.1_P02 SS-R-N-A-11 Picea sitchensis cDNA clone WS01017_P02 3', mRNA sequence. 0.0
FL-Next: tr=Os03g0270200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.90775e-27
N-terminus
sp_v2.0_unigene10143 SustainPine v2.0 2112
AutoFact: copper ion binding protein, putative; K13171 serine/arginine repetitive matrix protein 1 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 4.95543e-08
Internal
sp_v2.0_unigene13108 SustainPine v2.0 774
AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene16300 SustainPine v2.0 1122
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene22090 SustainPine v2.0 2058
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.42718e-37
Putative Complete
sp_v2.0_unigene22158 SustainPine v2.0 1853
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain