Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain

Term: IPR002687  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene259 SustainPine v2.0 2310
AutoFact: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp31-like 0.0
Complete
sp_v2.0_unigene9084 SustainPine v2.0 1780
AutoFact: homolog of nucleolar protein NOP56 [Arabidopsis thaliana] gb|AAF02835.1|AC009894_6 nucleolar protein [Arabidopsis thaliana] gb|AAG40838.1|AF302492_1 NOP56-like protein [Arabidopsis thaliana] gb|AAK62596.1| At1g56110/T6H22_9 [Arabidopsis thaliana] gb|AAM26 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleolar protein 0.0
Complete
sp_v2.0_unigene14598 SustainPine v2.0 1800
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable nucleolar protein 5-2-like 0.0
N-terminus
sp_v2.0_unigene17703 SustainPine v2.0 1809
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable nucleolar protein 5-2-like 0.0
N-terminus
sp_v2.0_unigene17833 SustainPine v2.0 3022
AutoFact: Nucleolar protein nop56, putative n=1 Tax=Ricinus communis RepID=B9RAI8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18617 SustainPine v2.0 2358
AutoFact: Nucleolar protein nop56, putative n=1 Tax=Ricinus communis RepID=B9RAI8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene19073 SustainPine v2.0 436
AutoFact: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC [Medicago truncatula] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp31-like 1.61149e-41
Internal
sp_v2.0_unigene23896 SustainPine v2.0 772
AutoFact: MAR-binding protein n=1 Tax=Nicotiana tabacum RepID=Q9AV96_TOBAC 6.0e-12
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable nucleolar protein 5-2-like 1.83604e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain