Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Uncharacterised domain CHP00451

Term: IPR004521  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1094 SustainPine v2.0 1360
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os02g0557600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 0.0
Internal
sp_v2.0_unigene6350 SustainPine v2.0 2051
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
sp_v2.0_unigene17078 SustainPine v2.0 1165
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
Complete
sp_v2.0_unigene20182 SustainPine v2.0 1154
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
Complete
sp_v2.0_unigene20743 SustainPine v2.0 624
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 6.44037e-14
C-terminus
sp_v2.0_unigene21297 SustainPine v2.0 1067
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
Complete
sp_v2.0_unigene26551 SustainPine v2.0 1760
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene33385 SustainPine v2.0 576
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 1.26782e-31
C-terminus
sp_v2.0_unigene57618 SustainPine v2.0 310
AutoFact: WS02743.C21_I03 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02743_I03 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 3.96279e-35
Putative N-terminus
sp_v2.0_unigene60787 SustainPine v2.0 875
AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l18-3-like 0.0
Complete
sp_v2.0_unigene61701 SustainPine v2.0 506
AutoFact: 60S ribosomal protein L18-2 [Arabidopsis thaliana] sp|P42791.2|RL182_ARATH RecName: Full=60S ribosomal protein L18-2 gb|AAF26138.1|AC011620_14 putative 60S ribosomal protein L18 [Arabidopsis thaliana] gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l18-3-like 0.0
Putative Complete
sp_v2.0_unigene62660 SustainPine v2.0 579
AutoFact: 60S ribosomal protein L18-2 [Arabidopsis thaliana] sp|P42791.2|RL182_ARATH RecName: Full=60S ribosomal protein L18-2 gb|AAF26138.1|AC011620_14 putative 60S ribosomal protein L18 [Arabidopsis thaliana] gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l18-3-like 0.0
Complete
sp_v2.0_unigene66357 SustainPine v2.0 376
AutoFact: putative 60S ribosomal protein L18 [Saccharum hybrid cultivar] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l18 3.95899e-26
C-terminus
sp_v2.0_unigene69316 SustainPine v2.0 426
AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l18-3-like 0.0
Putative C-terminus
sp_v2.0_unigene86199 SustainPine v2.0 616
AutoFact: Eukaryotic translation initiation factor SUI1-like protein n=2 Tax=Arabidopsis RepID=Q0WUR1_ARATH 0.0
FL-Next: tr=Eukaryotic translation initiation factor SUI1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain