Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L13

Term: IPR005822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12400 SustainPine v2.0 828
AutoFact: ribosomal protein L16a [Coprinopsis cinerea okayama7#130] gb|EAU93058.1| ribosomal protein L16a [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l13a 0.0
Complete
sp_v2.0_unigene15205 SustainPine v2.0 1212
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
Complete
sp_v2.0_unigene15344 SustainPine v2.0 2473
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
sp_v2.0_unigene15733 SustainPine v2.0 3404
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
sp_v2.0_unigene18147 SustainPine v2.0 1201
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l13a 0.0
Complete
sp_v2.0_unigene21282 SustainPine v2.0 1149
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
Complete
sp_v2.0_unigene26559 SustainPine v2.0 1475
AutoFact: 50S ribosomal protein L13, putative n=1 Tax=Ricinus communis RepID=B9T1K1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l13 0.0
Complete
sp_v2.0_unigene26886 SustainPine v2.0 1078
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene28518 SustainPine v2.0 1124
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
Complete
sp_v2.0_unigene48980 SustainPine v2.0 1161
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
Complete
sp_v2.0_unigene55238 SustainPine v2.0 124
AutoFact: 60S ribosomal protein L13a n=1 Tax=Acromyrmex echinatior RepID=F4W841_9HYME 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l13a 5.25694e-22
Internal
sp_v2.0_unigene63162 SustainPine v2.0 654
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] dbj|BAB09103.1| endosomal protein-like [Arabidopsis thaliana] dbj|BAE99006.1| multispanning membrane protein - like [Arabidopsis thaliana] gb|AED94164.1| putative endomembrane protein 70 [Arabidopsis 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endomembrane protein 70 2.37902e-39
C-terminus
sp_v2.0_unigene63634 SustainPine v2.0 595
AutoFact: T5E21.15 n=1 Tax=Arabidopsis thaliana RepID=Q9MA18_ARATH 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endomembrane protein 70 7.28675e-44
N-terminus
sp_v2.0_unigene64239 SustainPine v2.0 514
AutoFact: putative ribosomal protein I [Oryza sativa Japonica Group] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
N-terminus
sp_v2.0_unigene73211 SustainPine v2.0 385
AutoFact: putative syntaxin SYP111 (ISS) [Ostreococcus tauri] emb|CAL57055.1| putative syntaxin SYP111 (ISS) [Ostreococcus tauri] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.54441e-42
C-terminus
sp_v2.0_unigene77176 SustainPine v2.0 501
AutoFact: AL750688 RN Pinus pinaster cDNA clone RN06C01 similar to MULTISPANNING MEMBRANE, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endomembrane protein 70 4.88337e-27
C-terminus
sp_v2.0_unigene80950 SustainPine v2.0 360
AutoFact: putative syntaxin SYP111 (ISS) [Ostreococcus tauri] emb|CAL57055.1| putative syntaxin SYP111 (ISS) [Ostreococcus tauri] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phagocytic receptor 1b-like 0.0
C-terminus
sp_v2.0_unigene84580 SustainPine v2.0 329
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l13a 0.0
Internal
sp_v2.0_unigene85472 SustainPine v2.0 890
AutoFact: putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 0.0
Internal
sp_v2.0_unigene86298 SustainPine v2.0 676
AutoFact: EMP70 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phagocytic receptor 1b-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain