Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Poly(A) polymerase, RNA-binding domain

Term: IPR007010  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5294 SustainPine v2.0 1591
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
N-terminus
sp_v2.0_unigene8107 SustainPine v2.0 1285
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene8369 SustainPine v2.0 2625
AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Complete
sp_v2.0_unigene25030 SustainPine v2.0 2578
AutoFact: [A] COG5186 Poly(A) polymerase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
C-terminus
sp_v2.0_unigene25204 SustainPine v2.0 777
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase-like 9.80909e-45
Putative N-terminus
sp_v2.0_unigene28358 SustainPine v2.0 2668
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Putative Complete
sp_v2.0_unigene63074 SustainPine v2.0 457
AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 1.91262e-23
Internal
sp_v2.0_unigene68930 SustainPine v2.0 329
AutoFact: Nuclear poly(A) polymerase n=4 Tax=Arabidopsis thaliana RepID=O82312_ARATH 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 2 1.17765e-17
Internal
sp_v2.0_unigene78172 SustainPine v2.0 335
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.67645e-14
C-terminus
sp_v2.0_unigene85952 SustainPine v2.0 355
AutoFact: [A] COG5186 Poly(A) polymerase 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 3.2678e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain