Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: GH3 auxin-responsive promoter

Term: IPR004993  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene229 SustainPine v2.0 2450
AutoFact: pfam03321, GH3, GH3 auxin-responsive promoter 0.0
FL-Next: sp=Probable indole-3-acetic acid-amido synthetase GH3.5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
Complete
sp_v2.0_unigene2238 SustainPine v2.0 682
AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin responsive gh3-like protein 0.0
C-terminus
sp_v2.0_unigene3306 SustainPine v2.0 1612
AutoFact: Indole-3-acetic acid-amido synthetase GH3.17, putative n=1 Tax=Ricinus communis RepID=B9RG18_RICCO 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
C-terminus
sp_v2.0_unigene7039 SustainPine v2.0 1455
AutoFact: Auxin-regulated protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCH6_CUCME 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
C-terminus
sp_v2.0_unigene9151 SustainPine v2.0 2154
AutoFact: Probable indole-3-acetic acid-amido synthetase GH3.5 n=3 Tax=Oryza sativa RepID=GH35_ORYSJ 0.0
FL-Next: sp=Probable indole-3-acetic acid-amido synthetase GH3.5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
Complete
sp_v2.0_unigene11796 SustainPine v2.0 511
AutoFact: GH3 family protein n=3 Tax=Malpighiales RepID=B9I058_POPTR 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 0.0
Internal
sp_v2.0_unigene12029 SustainPine v2.0 853
AutoFact: indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana] sp|O81829.1|GH35_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.5; AltName: Full=Auxin-responsive GH3-like protein 5; Short=AtGH3-5 emb|CAA19720.1| GH3 like protein [Arabido 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
C-terminus
sp_v2.0_unigene12753 SustainPine v2.0 236
AutoFact: Indole-3-acetic acid-amido synthetase GH3.17, putative n=1 Tax=Ricinus communis RepID=B9RG18_RICCO 1.0e-22
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 2.43776e-22
Internal
sp_v2.0_unigene20132 SustainPine v2.0 656
AutoFact: indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana] sp|Q9FZ87.1|GH317_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.17; AltName: Full=Auxin-responsive GH3-like protein 17; Short=AtGH3-17 gb|AAF98442.1|AC021044_21 Unknown pr 2.0e-32
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 6.38558e-40
Putative N-terminus
sp_v2.0_unigene20440 SustainPine v2.0 2221
AutoFact: Auxin-induced GH3 protein n=1 Tax=Pinus pinaster RepID=Q4LAM0_PINPS 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
Complete
sp_v2.0_unigene21855 SustainPine v2.0 586
AutoFact: Indole-3-acetic acid-amido synthetase GH3.5 n=6 Tax=Brassicaceae RepID=GH35_ARATH 3.00004e-41
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 0.0
N-terminus
sp_v2.0_unigene33435 SustainPine v2.0 491
AutoFact: auxin-induced GH3 protein [Pinus pinaster] 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
Internal
sp_v2.0_unigene60952 SustainPine v2.0 651
AutoFact: Auxin-induced GH3 protein n=1 Tax=Pinus pinaster RepID=Q4LAM0_PINPS 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
Internal
sp_v2.0_unigene74835 SustainPine v2.0 385
AutoFact: GH3 n=1 Tax=Dimocarpus longan RepID=E2FHL1_9ROSI 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain