Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Plant specific eukaryotic initiation factor 4B

Term: IPR010433  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6777 SustainPine v2.0 1375
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U593_VITVI 0.0
FL-Next: tr=Extensin-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 0.0
Complete
sp_v2.0_unigene7003 SustainPine v2.0 1955
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4b 0.0
C-terminus
sp_v2.0_unigene9541 SustainPine v2.0 369
AutoFact: eIF-4B domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene18896 SustainPine v2.0 444
AutoFact: Translation initiation factor, putative n=1 Tax=Ricinus communis RepID=B9SVM6_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation initiation 1.27772e-18
N-terminus
sp_v2.0_unigene27414 SustainPine v2.0 2229
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4b 0.0
C-terminus
sp_v2.0_unigene61541 SustainPine v2.0 486
AutoFact: GRP multi-domain protein 2.0e-13
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain