Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Polyadenylate-binding protein/Hyperplastic disc protein

Term: IPR002004  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2513 SustainPine v2.0 2759
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
Complete
sp_v2.0_unigene4834 SustainPine v2.0 2676
AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 39 0.0
Complete
sp_v2.0_unigene14886 SustainPine v2.0 2532
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Complete
sp_v2.0_unigene16605 SustainPine v2.0 1487
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
N-terminus
sp_v2.0_unigene17893 SustainPine v2.0 532
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene19652 SustainPine v2.0 2752
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Complete
sp_v2.0_unigene21620 SustainPine v2.0 1105
AutoFact: poly(A)-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-like 0.0
Putative Complete
sp_v2.0_unigene23548 SustainPine v2.0 2847
AutoFact: poly(A)-binding protein [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene51448 SustainPine v2.0 508
AutoFact: HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] emb|CAB69849.1| anthranilate N-benzoyltransferase-like protein [Arabidopsis thaliana] gb|AAL08268.1| AT5g01210/F7J8_190 [Arabidopsis thaliana] gb|AAL90982.1| AT5g01210/F7J8_190 [Arabidopsis t 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transferase family protein 0.0
Putative C-terminus
sp_v2.0_unigene64987 SustainPine v2.0 535
AutoFact: putative poly(A)-binding protein [Mangifera indica] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.48158e-32
N-terminus
sp_v2.0_unigene69475 SustainPine v2.0 530
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) isoform 23 [Canis familiaris] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
Complete
sp_v2.0_unigene78563 SustainPine v2.0 501
AutoFact: Poly(A)-binding protein n=2 Tax=Nicotiana tabacum RepID=Q9M6E6_TOBAC 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-like 3.74802e-19
C-terminus
sp_v2.0_unigene79058 SustainPine v2.0 281
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.49094e-07
Internal
sp_v2.0_unigene86174 SustainPine v2.0 262
AutoFact: Poly(A)-binding protein n=1 Tax=Glycine max RepID=Q00M91_SOYBN 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 4.0947e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain