Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: TRAM/LAG1/CLN8 homology domain

Term: IPR006634  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1453 SustainPine v2.0 1749
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 0.0
Complete
sp_v2.0_unigene1706 SustainPine v2.0 1954
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3661 SustainPine v2.0 1323
AutoFact: Rop guanine nucleotide exchange factor 1 [Arabidopsis thaliana] sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like emb|CAB37499.1| putative protein [Arab 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene4586 SustainPine v2.0 1624
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Putative Complete
sp_v2.0_unigene5897 SustainPine v2.0 1388
AutoFact: LAG1 longevity assurance homolog 3 n=3 Tax=Arabidopsis RepID=LAG13_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Complete
sp_v2.0_unigene8807 SustainPine v2.0 1802
AutoFact: LAG1-like protein 1 n=1 Tax=Orobanche cernua var. cumana RepID=C6KE70_OROCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Complete
sp_v2.0_unigene8929 SustainPine v2.0 1714
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
Complete
sp_v2.0_unigene9528 SustainPine v2.0 1444
AutoFact: RHO guanyl-nucleotide exchange factor 9 [Arabidopsis thaliana] emb|CAB41934.1| putative protein [Arabidopsis thaliana] emb|CAB78366.1| putative protein [Arabidopsis thaliana] gb|ABE66063.1| hypothetical protein At4g13240 [Arabidopsis thaliana] gb|AEE83250 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9836 SustainPine v2.0 983
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13044 SustainPine v2.0 861
AutoFact: LAG1 longevity assurance homolog 3 [Arabidopsis thaliana] ref|NP_001184985.1| LAG1 longevity assurance homolog 3 [Arabidopsis thaliana] sp|Q6NQI8.2|LAG13_ARATH RecName: Full=LAG1 longevity assurance homolog 3; Short=LAG1 homolog 3 gb|AAF99825.1|AC027134_7 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 1 9.92524e-35
C-terminus
sp_v2.0_unigene15282 SustainPine v2.0 995
AutoFact: RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana] dbj|BAD94650.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31380.1| RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana] 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rop guanine nucleotide exchange factor 1-like 0.0
N-terminus
sp_v2.0_unigene18396 SustainPine v2.0 1474
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18476 SustainPine v2.0 709
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.66319e-33
C-terminus
sp_v2.0_unigene23579 SustainPine v2.0 1607
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
Complete
sp_v2.0_unigene25562 SustainPine v2.0 1925
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene34595 SustainPine v2.0 785
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 1 0.0
N-terminus
sp_v2.0_unigene36821 SustainPine v2.0 391
AutoFact: pfam03759, PRONE, PRONE (Plant-specific Rop nucleotide exchanger) 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rop guanine nucleotide exchange factor 1-like 5.89979e-39
Internal
sp_v2.0_unigene37128 SustainPine v2.0 484
AutoFact: ROP guanine nucleotide exchange factor 5 [Arabidopsis thaliana] gb|AED90943.1| ROP guanine nucleotide exchange factor 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rop guanine nucleotide exchange factor 1-like 0.0
Internal
sp_v2.0_unigene64203 SustainPine v2.0 418
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: transmembrane protein 8.39774e-16
C-terminus
sp_v2.0_unigene64658 SustainPine v2.0 489
AutoFact: Unassigned protein
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain