Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: XPG/RAD2 endonuclease

Term: IPR006086  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene70476 SustainPine v2.0 346
• AutoFact: PPR multi-domain protein 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at3g29230-like 1.43069e-38
Internal
sp_v2.0_unigene72525 SustainPine v2.0 351
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-44
N-terminus
sp_v2.0_unigene74879 SustainPine v2.0 297
• AutoFact: DNA repair protein UVH3 [Arabidopsis thaliana] sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltNa 7.0e-28
• FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 5.31349e-33
N-terminus
sp_v2.0_unigene77375 SustainPine v2.0 386
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.14781e-39
Putative C-terminus
sp_v2.0_unigene77646 SustainPine v2.0 415
• AutoFact: Flap endonuclease-1, putative n=1 Tax=Ricinus communis RepID=B9RFS3_RICCO 2.0e-07
• FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flap endonuclease- 2.84276e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain