Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: XPG N-terminal

Term: IPR006085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1635 SustainPine v2.0 2361
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
Putative Complete
sp_v2.0_unigene6684 SustainPine v2.0 1616
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Flap endonuclease 1-A; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: flap endonuclease 1a 0.0
Putative Complete
sp_v2.0_unigene17015 SustainPine v2.0 1971
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Complete
sp_v2.0_unigene19928 SustainPine v2.0 405
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g13410-like protein 0.0
Putative Complete
sp_v2.0_unigene27085 SustainPine v2.0 1346
AutoFact: DNA-repair protein UVH3, putative n=1 Tax=Ricinus communis RepID=B9RUC5_RICCO 0.0
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-repair protein 0.0
Internal
sp_v2.0_unigene37166 SustainPine v2.0 342
AutoFact: DNA repair protein UVH3 [Arabidopsis thaliana] sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltNa 9.0e-37
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-repair protein 1.4013e-45
Internal
sp_v2.0_unigene39456 SustainPine v2.0 198
AutoFact: Exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SU84_RICCO 2.0e-10
FL-Next: tr=Exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 5 -3 exonuclease family protein 5.00672e-10
Internal
sp_v2.0_unigene42670 SustainPine v2.0 228
AutoFact: exonuclease 1 [Arabidopsis thaliana] gb|AEE31111.1| exonuclease 1 [Arabidopsis thaliana] 3.0e-26
FL-Next: Isoform 2 of Exonuclease 1 OS=Arabidopsis thaliana GN=EXO1 0.0
Blast2go: exonuclease 1 8.43038e-34
Internal
sp_v2.0_unigene47362 SustainPine v2.0 273
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 9.92844e-37
Internal
sp_v2.0_unigene47391 SustainPine v2.0 217
AutoFact: DNA repair protein UVH3 [Arabidopsis thaliana] sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltNa 3.0e-15
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.10701e-23
Internal
sp_v2.0_unigene48475 SustainPine v2.0 618
AutoFact: Contains similarity to excision repair protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana] 2.0e-22
FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exonuclease-like protein 2.84613e-28
N-terminus
sp_v2.0_unigene48969 SustainPine v2.0 416
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T4R0_RICCO 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 2.2169e-39
Putative Complete
sp_v2.0_unigene51744 SustainPine v2.0 306
AutoFact: Exonuclease n=2 Tax=Cucumis RepID=A5Y728_CUCME 8.0e-19
FL-Next: Isoform 2 of Exonuclease 1 OS=Arabidopsis thaliana GN=EXO1 0.0
Blast2go: exonuclease 1 1.4188e-22
N-terminus
sp_v2.0_unigene58535 SustainPine v2.0 291
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.39446e-38
N-terminus
sp_v2.0_unigene59928 SustainPine v2.0 333
AutoFact: 5'-3' exonuclease family protein n=4 Tax=Arabidopsis RepID=Q94A33_ARATH 1.0e-32
FL-Next: sp=Exonuclease 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 4.29358e-42
Internal
sp_v2.0_unigene62064 SustainPine v2.0 598
AutoFact: Pentatricopeptide repeat protein n=1 Tax=Gossypium hirsutum RepID=D2STE6_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene64420 SustainPine v2.0 374
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
sp_v2.0_unigene67289 SustainPine v2.0 592
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 5.04467e-44
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Putative N-terminus
sp_v2.0_unigene68383 SustainPine v2.0 329
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.02457e-40
Internal
sp_v2.0_unigene69376 SustainPine v2.0 277
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial; Flags: Precursor emb|CAB67643.1| putative protein [Arabidopsis thaliana] gb|AEE7 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.77088e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain