Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene62300 SustainPine v2.0 531
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant protein 0.0
Putative C-terminus
sp_v2.0_unigene62319 SustainPine v2.0 1608
AutoFact: Late embryogenesis abundant-like protein (Fragment) n=19 Tax=Picea sitchensis RepID=E0ZAL6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
Complete
sp_v2.0_unigene62644 SustainPine v2.0 497
AutoFact: FAP multi-domain protein 1.0e-21
Coding
sp_v2.0_unigene62851 SustainPine v2.0 576
AutoFact: Drf_FH1 multi-domain protein 2.0e-37
Coding
sp_v2.0_unigene63818 SustainPine v2.0 369
AutoFact: Extensin_2 multi-domain protein 2.0e-24
Coding
sp_v2.0_unigene64166 SustainPine v2.0 477
AutoFact: FAP multi-domain protein 1.0e-19
Coding
sp_v2.0_unigene64310 SustainPine v2.0 600
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant protein 0.0
Putative C-terminus
sp_v2.0_unigene65262 SustainPine v2.0 360
AutoFact: Extensin_2 multi-domain protein 5.0e-27
Coding
sp_v2.0_unigene65872 SustainPine v2.0 415
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 3.0e-26
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 1.813e-31
C-terminus
sp_v2.0_unigene78636 SustainPine v2.0 710
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gb|AEE76239.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of cell 0.0
Internal
sp_v2.0_unigene80182 SustainPine v2.0 322
AutoFact: pfam04554, Extensin_2, Extensin-like region 3.0e-24
Coding
sp_v2.0_unigene80877 SustainPine v2.0 1015
AutoFact: Structural constituent of cell wall, putative n=1 Tax=Ricinus communis RepID=B9S9J6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
Complete
sp_v2.0_unigene82037 SustainPine v2.0 444
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
C-terminus
sp_v2.0_unigene83809 SustainPine v2.0 1925
AutoFact: Flocculin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FIF9_TRIVA 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v2.0_unigene83839 SustainPine v2.0 1075
AutoFact: Proteophosphoglycan ppg1 n=1 Tax=Leishmania mexicana MHOM/GT/2001/U1103 RepID=E9B5T6_LEIME 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v2.0_unigene83841 SustainPine v2.0 876
AutoFact: Drf_FH1 multi-domain protein 9.0e-21
Coding
sp_v2.0_unigene83846 SustainPine v2.0 858
AutoFact: Flocculin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FIF9_TRIVA 1.0e-10
FL-Next: sp=Pollen-specific leucine-rich repeat extensin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoform cra_a 4.96001e-11
Putative C-terminus
sp_v2.0_unigene83849 SustainPine v2.0 837
AutoFact: Putative protein TPRXL n=3 Tax=Hominidae RepID=TPRXL_HUMAN 8.0e-06
Coding
sp_v2.0_unigene83855 SustainPine v2.0 587
AutoFact: Drf_FH1 multi-domain protein 4.0e-23
unknown
sp_v2.0_unigene83858 SustainPine v2.0 433
AutoFact: Drf_FH1 multi-domain protein 8.0e-14
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain