Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene24166 SustainPine v2.0 1692
AutoFact: Structural constituent of cell wall, putative n=1 Tax=Ricinus communis RepID=B9SWC5_RICCO 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: structural constituent of cell 0.0
Complete
sp_v2.0_unigene24217 SustainPine v2.0 1421
AutoFact: pfam06830, Root_cap, Root cap 1.0e-25
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: structural constituent of cell 0.0
Complete
sp_v2.0_unigene24735 SustainPine v2.0 1496
AutoFact: Atrophin-1 multi-domain protein 5.0e-32
Coding
sp_v2.0_unigene24754 SustainPine v2.0 965
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Coding
sp_v2.0_unigene26609 SustainPine v2.0 596
AutoFact: Extensin_2 multi-domain protein 5.0e-18
Coding
sp_v2.0_unigene31669 SustainPine v2.0 512
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 2.0e-28
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 6.41537e-34
C-terminus
sp_v2.0_unigene33288 SustainPine v2.0 911
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of cell 0.0
C-terminus
sp_v2.0_unigene33929 SustainPine v2.0 1421
AutoFact: MDR-like ABC transporter [Catharanthus roseus] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant-like protein 1.40057e-40
Putative N-terminus
sp_v2.0_unigene35059 SustainPine v2.0 636
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
C-terminus
sp_v2.0_unigene40416 SustainPine v2.0 529
AutoFact: TT_ORF1 multi-domain protein 8.0e-11
Putative coding
sp_v2.0_unigene41380 SustainPine v2.0 582
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 1.0e-26
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 1.61333e-31
C-terminus
sp_v2.0_unigene56073 SustainPine v2.0 330
AutoFact: Drf_FH1 multi-domain protein 6.0e-20
Coding
sp_v2.0_unigene58766 SustainPine v2.0 374
AutoFact: Late embryogenesis abundant protein-like protein n=1 Tax=Arabidopsis thaliana RepID=O81843_ARATH 6.0e-07
FL-Next: tr=Late embryogenesis abundant protein-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: late embryogenesis abundant protein 6.52278e-08
Internal
sp_v2.0_unigene60874 SustainPine v2.0 846
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
C-terminus
sp_v2.0_unigene61004 SustainPine v2.0 783
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant protein 0.0
C-terminus
sp_v2.0_unigene61103 SustainPine v2.0 1102
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
sp_v2.0_unigene61581 SustainPine v2.0 451
AutoFact: Drf_FH1 multi-domain protein 2.0e-34
Coding
sp_v2.0_unigene61602 SustainPine v2.0 629
AutoFact: Drf_FH1 multi-domain protein 2.0e-33
unknown
sp_v2.0_unigene61703 SustainPine v2.0 441
AutoFact: Drf_FH1 multi-domain protein 2.0e-32
Coding
sp_v2.0_unigene61922 SustainPine v2.0 508
AutoFact: Drf_FH1 multi-domain protein 4.0e-26
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain