Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Outer membrane autotransporter barrel

Term: IPR006315  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene24762 SustainPine v2.0 569
• AutoFact: Drf_FH1 multi-domain protein 4.0e-15
Coding
sp_v2.0_unigene25605 SustainPine v2.0 437
• AutoFact: GRP multi-domain protein 4.0e-12
Coding
sp_v2.0_unigene25982 SustainPine v2.0 425
• AutoFact: Selectin, platelet (P-selectin) ligand, isoform CRA_b n=2 Tax=Mus musculus RepID=Q3TA56_MOUSE 3.0e-08
• FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
• Blast2go: sica antigen 1.52771e-11
Internal
sp_v2.0_unigene26225 SustainPine v2.0 782
• AutoFact: FAP multi-domain protein 3.0e-19
Coding
sp_v2.0_unigene26505 SustainPine v2.0 907
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 8.0e-30
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: glycine-rich rna-binding protein 1.60522e-29
Complete
sp_v2.0_unigene26609 SustainPine v2.0 596
• AutoFact: Extensin_2 multi-domain protein 5.0e-18
Coding
sp_v2.0_unigene27016 SustainPine v2.0 1603
• AutoFact: FH2 domain containing protein 0.0
• FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: actin binding 0.0
Putative C-terminus
sp_v2.0_unigene29316 SustainPine v2.0 483
• AutoFact: Formin-like protein 3 n=4 Tax=Poaceae RepID=FH3_ORYSJ 0.0
• FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: formin-like protein 14 0.0
Internal
sp_v2.0_unigene30468 SustainPine v2.0 592
• AutoFact: plastocyanin-like domain-containing protein [Arabidopsis thaliana] gb|AAB95306.1| putative phytocyanin [Arabidopsis thaliana] gb|AEC07879.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastocyanin-like domain-containing protein 3.72481e-34
N-terminus
sp_v2.0_unigene30825 SustainPine v2.0 1596
• AutoFact: Collagen multi-domain protein 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Putative Complete
sp_v2.0_unigene37265 SustainPine v2.0 366
• AutoFact: Extensin_2 multi-domain protein 7.0e-17
Coding
sp_v2.0_unigene38438 SustainPine v2.0 346
• AutoFact: FH2 domain containing protein 1.0e-20
• FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: formin-like partial 0.0
Putative C-terminus
sp_v2.0_unigene44549 SustainPine v2.0 343
• AutoFact: Drf_FH1 multi-domain protein 4.0e-10
• FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: formin-like protein 14 1.53598e-25
Internal
sp_v2.0_unigene45231 SustainPine v2.0 357
• AutoFact: FAP multi-domain protein 4.0e-16
Coding
sp_v2.0_unigene46482 SustainPine v2.0 438
• AutoFact: Drf_FH1 multi-domain protein 1.0e-15
Coding
sp_v2.0_unigene52471 SustainPine v2.0 370
• AutoFact: FAP multi-domain protein 1.0e-12
Putative coding
sp_v2.0_unigene56073 SustainPine v2.0 330
• AutoFact: Drf_FH1 multi-domain protein 6.0e-20
Coding
sp_v2.0_unigene60780 SustainPine v2.0 681
• AutoFact: Trypan_PARP multi-domain protein 4.0e-15
Coding
sp_v2.0_unigene60918 SustainPine v2.0 786
• AutoFact: Gly_rich multi-domain protein 4.0e-17
Coding
sp_v2.0_unigene61103 SustainPine v2.0 1102
• AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain